Detail



ID : Ahg356363

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356363|fgenesh1_pg.C_scaffold_8000150
Sequence
ATGGGTTCTT CATCGTCCGG CAAAAAACGG AAAGGACAGA GAAAGAAAGA AGAAGAAGAA GAAGAAGAAG ACATTAACGT TAACTCTATC CCGGAGAATT CGAGAGAAAT CGTACAGGCT ATGAAGGAGA TCGTGAATTG CTCCGAACAA GAGATTTACG ATATGCTTGT AGAATGCAAC ATGAACGCTG ACGAAGCCAT GAATCGTCTT CTTTCTCAAG ATAGTTTTCA GGAAGTGAAG AGTAAACGAA ACAAGAAGAA AGAGGCCAAG GAAAAGTCAA GAATGGGCGA GAGAGACGAA GGCAGTAACG TAAATGCGGA TAGTGTTCCG GTGGATTTCA AAGAGGTTGT ACAGAATGTG CAGGAAATTG TCAAGTGCTC AGAAGAAGAG ACTAAAAAAA TGCTTGTAGA ATGCAACATG GATGCTGACA AAGCCGTTAA TCGTCTTCTT TCTCAAGATA GTGTTCAGCA AGTTAAGAGC AACCAAGACG AGAAGAAAGA GAGCTTGGAC ACATCGGATT CTCAAAGAGT TGATAGTAGC AACCAGAATC GTGAATTGAG GAATGGCAGT GATAATTATG TTGGTCAAGG TGGTGGAAAC AAGTTTGACT CAGATGAGAC GAGTAATGTG CAAGGAATTC GTAATCAGTT GGCTAGTTCA TCTACTACAG CCGGTATTCT TGGTCCTGGT CCTCCATTGA ACAGAAATGT ATTAAATGTT GAAACTAAGA GAATGCCAAA AAGCTCAGGT GAAGCAGTTC CTTCGTTATC TGTGCCATCT TCTAGGTTGA TACCTGCTTG GGGATGTGGT ACCTCTGGTC AGAAAACAAT GGCTGATGTT TTGAAGATGG GTTTAGCTTC ATCAAACGAG AGTGTAACTA AAGCTCCTGT CAAGGATGAT TGTCCCTTAC CTGAGAGGCC AAATGAGTCT ACTGCTAGAA GAGATCAACT TCGAGAGTCT GCATCGGTAT CCAACCAAAA CTTGTGCGAT GATGATTTTG CTTGTCAATT GGCTAACTCA GTTATTGAGT CTGCTGCTGG AGAAGATCAA CTTGGAGAGT CTACTTCAGT ATCTAACCAA AATTTTCGTG ATGACGACTA TGGAGGCTCA CAGTTGTTGT GTGACAATCA CAGTAACAAA AATGATGTGA CTGAATTTGA GCACAATCAA AACAAAGATC CACCGGTGTC TGTTGTCACC AGTTTACTGC AACTCCCTAC AGAGAATGAT GAGCCGGAAG CACCGGTTAA AGAGTTACAG CATTTGAGAT TTGGTAATTA TGGTTCTGGG ATGAATGGAT CTGTTGTTGT GAAGATGGGC ATAGCTTCAG TAAAAGAGAG TGTAACTAAA GGTCCTCTCA AGGATGATTG TCACTTACCT GAGAGGACAG ATGAGTCTGC TGCTAGAAGG GATGAGTCTG CTTTGGTATC CAACCAAAGC CTGCATGACA ATTTTTCTTA TTTCTCTAAC TCAATTTTTG AGTTTGATGC TAGAAGAAAT CAACTTCGAG AGTCTGCATC GGTATCCAAA CAAAACTTGC GTGATGACGG TGTTACTTAT CCATTATCTA CCTCATATGA TGCTAAAACA GAACAATTTC GCAAGTCTAC TGCAGAATTT ATCCACAACT TGCGTGTTGA CGATGTTGCT TGTCCGTTGT CTAACTCATT TGTTGAGTCT GCTGCTAGAG GAGATCAATT TGGAGAGTCT ACTTCTTCAA TATTCAACCA AAGATTTCGC GACGATGACT TTGGAGGCTC ACAGTTATTG TGTGACAACT ACAATAACAA AAATGATGAG ACTTACCTAG TGCAAAGACG TTCGTTTATT GAGTCTGCAT CGCTATTCAA ACAAAACTTG CGGGATGACA GTGTTACTTA TCCATTATCT ACCTCATATG ATGCTGAAAG AGAACAATTT CTCAAGTTTA CTCCAGAAAT TATCCAAAAC TTGCGCGTTG ACGATCTTGC TTCTCAGTTG TCTACCTCAT TTATTGAGTC TGCTGCTATT TCAGCCAAAG ATCCACCAGC GTCTGTTGTC ACCAGTTTAC AGCAACTCTC TACAGAGAAT GATGAGCCGG AAGCATCTGT TAAAGAGTTA AAGCATTTGA GATTTGGTAG TTTTGGTTCT GGGATGAATG GATCTTGCCA ACCCAGCGGT CTCCCATCAC GGTTCTTGGA TGATGATGAC TCAGAAGATA TATCCGATTT TGCAGATGAT TTGTCGTTAA GTTACCTGAA CACAAGAGAT GGTGAGTTCC ATGAAGATGA AGAACAACGA CTACGGATTA ATGCTGCTAA TGGTCAGACA GAACCTACTC AAGAAAATCA ATACGAGTCT TCATCTGCTA GAGATTTCGT ATTTGATACT AGGCAGCTAT TGAATCCTGT GGTGGCTCCT TTAAGCCTTC AGATGCAGAA TATTAATACC TTCCCTGCTA TGCGTCAACA AGCATACACA AGGGAACCGG ATCCTCAGTA CTCGGCTTCT CCTCACAATC AGTCAATGCC TACTACATCT TCACTTTGTC CTAGGCTATT GGGTTCAGTG ACTGAGGCGC TACTAAACAC TTCTATCAGT GAACCACAGA TGAATCAACA AGCCATGAAC AACCATTACT CTCAGCCTAT TATGGTTCCT TCAGGGAATA ATGGTAATAT GATGAACTAT CCGTACTCTC AGACAACACA GAATGGCACC TACAACATGT CACCGTCAGC ATCTCACCAA CATGGTGGTC GTAACAACAG CAGTTACCAT CTTAGATCTT TAACTGCACC GCTTCCTCAC TACAGAAACA GTGTTCTTTC TCCATCTGCT GTTCCTTTTG TTCCTTCCAC TCACAGTTCC GCTTACGGTT CCACTAATGG TTCGACTCAT GGTTTTGGCA TGTTGAGTGA TAACGCTCCA AACTTGAGGT TTGAGTATGA AGATGACTTC CACTCACAGT TTAGCAATCA CTTGGCAACA CTTCAGCATC AGAATGGGAC CCCTAGTATG TGGACTCCTC AAGGACTCAA CGACTCAGGA AGCACTTATT ACAGGTTATA CTCGGGTCCT CAGAATCAGC AGTCACAGAG TTTGAGACAT AGCCAACAAC AACAGCAGCA AGAACCAGAG CAGACTTATA GAAGGATTGG CTAA 
Length3144
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1010206.. 1014884
Download Sequence
A.thaliana
AGI-codeAT5G46380.1
DescriptionKinase-related protein of unknown function (DUF1296)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.6577 Ahg926701
29.7489 Ahg497001 Glycosyl hydrolase family 38 protein
52.2015 Ahg894993
56.6569 Ahg489392 cyclin a2;1
60.349 Ahg890299
61.1882 Ahg942438 mRNA capping enzyme family protein
66.5432 Ahg904502 nucleic acid binding
70.8661 Ahg933782
83.7854 Ahg888697 Peroxidase superfamily protein
93.4291 Ahg909468 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression