Detail



ID : Ahg356466

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356466|fgenesh1_pg.C_scaffold_8000253
Sequence
ATGGTACAAG TGATTCCCGC ACATATCAAA GATGTCTGGG ACGCCTGGAA CATCAGAGGA ATTGTAATTC TCAGTCTCTC GATTCAGACA ATTCTCATCA TCTTAGCACC ATTGAGGAAA AGAACATCCA ACAGGTTCCT GGCTTTAGTC CTGTGGTTGT CTTATCTCTT AGCAGATTGG TCTGCAAACT TTGTGATTGG ACTTATCGCC AAGAATCAAG GGAAAGAATT GAAGCCAGAT GATCCTCCTC AAGACCAGCA GCTCATGGCT TTGTGGGCAC CGTTCTTGCT CTTACATCTT GGTGGACCAG ACACAATCAC TGCATACTCT CTTGAGGACA ATGCTCTTTG GCACAGACAC TTTCTTGGCC TGGCTTTACA GGCTCTTTCA GGTGCATATG TTGTTATCCA ATCTCTACCT AATCCTCTTT GGGTGATCAT ACTGCTTTTG TTCATTGCTG GGACCTTAAA GAGTCTTATG GTCAATAACA TCTTTAGCTC TGACCAAAGA GAAGAGAGCA GGGAATTCTT CAGTAAGTTA ACAGACGAAG AAGCTTTGAG GATTTTAGAG ATGGAGCTCG GTTTTATCTA CGAAGGTTTA TACACAAAAG TTTCGGTTCT TCATACTTGG GTTGGAGCTT TGACTCGAAC TATAGCTTTG GGATCTCTTC TGTCAGCATT CTGCATGTTT CATTATAGAC CCAAGAAGAG CCATGAGTTT CATAGAGCAG ATATCGTGAT CACCTACACT TTGTTCTTAG TTGGAATAGC TCTGGATCTT GTATCTCTCC TCATGATCCT GCCCTCAGAC TGGACATTTG CTGTTATCAG TAGGATAAAC GAAGACGAAG TAGACAGCGG CTCATGGATA GACCCCGCAC TCAAGTGGTT CCTTGGTTTG AAGCAGCTGC ACTGGAAGAA GCAAAAAAGC TGTGGAGGAC TCAATCATGA GGTGCTTAAC ACGCCGTTTC TAATCCAAAG ATGGGCAGGA AGCATCAAGC TGTTCAACTT TATTGCATAC TCTGTGAAAG CAGATATAGA GAGGATCCAT GATGTCAAGG GTAGAACACG TCGGCTTGTG TGGAAAGCCA TACTTCACCC TTTCATTTAC GCTATCAACA CCTTCAGGAA ATTGTTCGAA ACAATCGCTA TTTGGCATCA TGATCTTCAG CAGTATATAA GATATGTCAT CAATATGTTG TCAAGAAAAA ATCCAGTAAC TCGTTGTATT ATCATTTTTG TTGAGTTCTG GTTAATGATA CCTCACTTCT TCACGTTAAT TGGCAACTAC ATTACCGACT TCCTCGGCAT TAATGATCTG CTGGATGAGA TCATTCTGAT AAGATCTGTA CACAGTGAAC CCTTGACAAA AGAGCTGTGG GTTTTCATAT TTACTCAGCT TAAATCCAAA CTTCAGCGTC CAGACAAAGA GAGAAGCAAA ACAAAAGCCG GAAGGAAAGG ATGGGCTTCT GACATCAACG AGTTAGGAAT GGCGGATACA AAACGACTGG TGCGTTATAT AGCAGATGTT GATTACGACC GAAGCCTTAT GCAGTGGCAT ATAGCAACTG AGCTATGTTA CCAAGAAGAA GCGTCCACTA AAGAGAACTG TGATGACCGT GAGTTCAGCA AAATCCTCTC AGACTACATG ATGTATCTGT TGATTATGCA GCCAAAGCTG ATGTCGGAGG TTGCAGGGAT AGGGAAGATC AGGTTTAGAG ACACGTTGGC CGAAGCTGAA AAATTCTATA AGAGGCGGCA TATTGAGAAC TCGAGTGTGA AAAGAGCAAG CCATGAGATT CTTTCGGTCA GGATAGAGAT TCAACCAAGG AATGTTAAGG GAAACGAAAG CAAATCTGTG TTGTTCGAGG CTAGGGCACT GGCGAAAGAA CTCAACAAGA TGCGTGAAGA AAACATGTGG AGTGTAGTAA GCAAAGTGTG GATGGAGTTG CTATTCCACG CAGCATGCAA TTGTGATGCT ACAGCGCGTA TGGAACAGCT TAGCAAAGGA GGAGAGCTCC TCGTTTTTGT TTGGCTAGCA TTGGCTCACC TTGGCCTTGG AGGTCAGTTG GGTTCATCAG CAACGGAGAC GTCCGAAACA AACTGA 
Length2106
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1618567.. 1620918
Download Sequence
A.thaliana
AGI-codeAT5G45460.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg925999
3.87298 Ahg936785
5.91608 Ahg922096 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)
7.2111 Ahg951379
8.83176 Ahg942858
8.83176 Ahg942857
10 Ahg887692 Transducin/WD40 repeat-like superfamily protein
10.583 Ahg927927 other RNA
15.2971 Ahg892858 Ribosomal protein S19 family protein
17.7482 Ahg344160
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression