Detail


ID : Ahg356527

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356527|fgenesh1_pg.C_scaffold_8000314
Sequence
ATGAGGCCAG TTACGCCCTC GGTGGTCTCC CCCCTGCTGG AACCACCAGA TCTGCTCATG CTTTCCTTGT CTAGGCTTCC TCCGGCTACG TTGATCTTTC GCCGAGATAG GCTGCTTCCG CCGCCTCTTC TATCGCAAAT CTCGTGGTTG CACTTCACCA GAGTTTCGTC AACAAGTATC TTCTTCTCGG GATCCGCCTT TGATTCCCGA AGAATTATCT CCCTCCCCGG GAACAGCTAC TCCGTCAATT TCTCCTCTGC CTCTCCGAAA ATTCAAACGC TTTGGTCTAT CCAAGCGATT CTGGTGACTC CATCGACCTC GGCCTCCATC TCGGTCTCAA TGTCCGATGG ATTTCTGACC ACCACAATCT CTAGATTGTT AGATCTGGTG GTCGGAGATC TTGTTTCGGC TGAGCATGGT CTCGCCTGCT CTCTGCCATG CCCTTCAATC GGCAAGAAAT GCTTCCACCG TTCTCCGGTT AACCTCATCA CTGAAGTTGA ACCACTTTTT CCACCTCGAT TGGGATTTTC CTCGATAAAC TGGAATGGTT CCCCGACGAT CAACGGCCGC CGCCTCCTCT GCACTCAAAA CGCTGAAGTT GTCCCTAGGG TTTCTAGTGG ACCAAGTTTG GGCATAGCTA GTAATGGGCT AGGTTATGGA TTTACTACTA ATGGGCCTTA CAGAACAAAA GCCCAGAACT GCTTTTGGAA GAGAACATCT TCGAATTCCT CCCTGTGGGA GAGACCATTG TTATATTACC TCATTTTTGG CTTATCAGAG ACTAAGGATA TGTTGTATCT CTTTCCAAAT TTTAGAGCTT GTATAGCTTT TTTTTCTCTC TTTGTAGAAG ATTCTCTTGA ACTTGAACTT ATGGGAGGTT ATACTCTTAT GTTCTCAAAT GACTATCCGG TTCGTTTGGT GTCGATTAAT GCATGTTTGT GGGTTCTTGA AACTTCAATT AGAAACCAAG TAATTACATC ATTTTTTGTT CATCCGGTTG TTAAAGACCG AGACTCTAAT TGGATAAGTT TGGGCCATAA TGGCACGCCT AGAGGAGATG TATGGTTCTT GAAAGATGAT TACTTTTTGA TCACCGTGTA TGAGGAAAAG AGAAGAACAA ACCACCAACT AAACACTTCG CTTCTTATTT CACTTGATTC CTCCTTCATG GAGAGACTAT TCCCCCTTTC CCTCTTCCTT GTAAGGGAGT TTTACCGAAA AGTTGTTAGG CCTTTGCTAT TTGACGGTTC AAAGGCTCCT AAGTTTCAAG AAAGCGGGTG TGAAAAAAAA CGCACCGAGA ATTTTCGTTG GAGAACGGAC ATCAGACTCT CGATTTCCTC TATCGTTTTC TCGCGACTCT CTAGGGTTAG GGTTTGTTTA ATTTCACGCA TTATTCTTCT TCTTCTTCTT CTGCAATTCG CGACTGGAGA AGTACCTATT TTCATCGCAG GTTTGGATAT TTTCGTTCTA GAATATACTC TAATGGCTGG AGTTCTAGCT GGAGAATGTT CGTACAGTGA GATTGGAGTT TCATCACTCT CCAGGAATTC TCATGTAAAG CAAGACAAGG TTGAAATGAG AGTCGCTGTT CGTATTGCTG AGAACCGTGT AATCCTCTTA TCTTCTTCAC ACAATGAAAC AGAGGTACCT ACTACTTCTT TGGTTACCAA TCTTCAAATG CCAATACGCG GTCGCCGGCT GAACCCTATT CGTTATACTT CTTTGCATAC CAATCTCGAA ATGACAGTGG CCGGTTTGCC TGTGGACCTT GTTCATTGCT CTTCCATCCA TGGATTGTTC TGTTTGGTAG ATCCTTCAGA TCCAGGTCGG TTCACGATAT GTAACCCTAG CACTAGACAA GTCATAACAT TGCCGGATAT CAAAGCTTTT AGTGGTAGAA GAAAGCGCAT AAATATGTTC TTGGGATATG ATCCTGTTGG TAATGAGTAC AAAGTATTGT GTAGCACGGC TGTGCATGGT GAACCTTGTC AAGTGCACAA GGTTTTAACA ATTGGAGGAG GAAATCTTTC GTGGAGAAGC ATCAAAGGTA GAAAAATCCC TCGTTATACT GTTGTCACAA ATGGAATATG CATCAATGGG ATGGTGTTTT ACGGTGGGTT GACTACCAAA AGACAAGAGA AGAAATTGTG GATTTTTCGT TTTAACGTTA GAAGTGAGGG CATGAGTTCT ATCAGCACAT ATCCGCAGGT CACAAATCAT GGATCATTGA TCAACTACAA TGGGAAGGTA GCCGCGGCTA GTCCCTTGCC ACGTGCTCCT CGTGGTAGTT TTGATTTGTG GGTTCTAGAT GACTTCGACG AAAAACGTAG ATGGTTAAGG GAAAAATTCA ATGTCCACCC TTTGGTGTTG CATTTGTCAG GGAAAACTGA GTTAAAAATC TTAGGCATGA ACAGAAGTAA CGAGGTCGTT ATAGGTCCGC TAAAGGTGCC CCCCAAACAT GAGCCATTGT ACATTTACTA CTTCCACAAA GGAGGCCAGA AATTAATTAG AAGAGTTGAA CTTGAAGGAT TTGAAGAGTT TAGGTGCAAT CATACAAGTG ACGAGCAATG TGTTTGTCAA GTCATTTTCT CACCGGAACA CTTTGAAAGT CTCGTGTCTT TGTAA
Length2625
Protein Sequence
Protein Residue
Map Locationscaffold_1: 21987166.. 21988446
Download Sequence
A.thaliana
AGI-codeAT5G45190.2
DescriptionCyclin family protein
TAIR curator summaryEncodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).
Alias
Gene coexpression
MR
MR Locus Description
38.9358 Ahg351609 Protein of Unknown Function (DUF239)
43.1393 Ahg485725 pleiotropic drug resistance 9
44.7437 Ahg493616 Duplicated homeodomain-like superfamily protein
47.3286 Ahg942510 transposable element gene
53.1695 Ahg489113 Plant protein of unknown function (DUF247)
57.0263 Ahg495065 ethylene response factor 110
68.3228 Ahg341194 Homeodomain-like superfamily protein
79.7496 Ahg484455 AP2/B3-like transcriptional factor family protein
87.7269 Ahg336658
93.0806 Ahg916018 beta-galactosidase 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression