Detail



ID : Ahg484455

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484455|fgenesh2_kg.5__447__AT3G26790.1
Sequence
AATCTCTGAT TGCCCAGCGT CCATTTTAAG CCTCTGTTTC GATCTGCACA ACACACATAC ACACAACACA ACACAAACCA CAGTCTCTCT CTATCTTCTC TTTCTCTCTC TCTATCTCTA TCACTGAAAC CCAAAGAGAT CCACCATTTG TTCTTTTTTC CTTCATACAG AGAACTGTTT TCTTCCACAC TTCCTTTTTA CTAGGCAGTG TTAACCAATT GAGAGAGAAA AATGATGGTT GATGAAAATG TGGAAACCAA GGCCTCTACT TTAGTGGCAA GTGTTGATCA TGATCATCAT GGGTTTGGAT CCGGGTCGGG TCATGATCAT CATGGGTTAT CGGCGTCTGT GCCTCTGCTT GGTGTTAACT GGAAGAAGAG AAGGATGCCA AGACAGAGAC GATCTTCTTC TTCCTTTAAC CTTCTCTCTT TTCCTCCTCC TATGCCTCCT ATTTCCCACG TGCAAACTCC TCTCCCCGCA CGTAAAATTG ACCCAACAAA GCTAAGATTC CTCTTCCAAA AGGAACTCAA GAACAGTGAC GTCAGCTCCC TCCGCCGTAT GATACTCCCC AAGAAAGCGG CAGAGGCTCA CTTGCCGGCA CTGGAATGCA AGGAAGGGAT TCCAATAAGA ATGGAAGATT TGAATGGTCT TCACGTTTGG ACCTTCAAGT ATAGGTACTG GCCAAACAAC AATAGCAGAA TGTACGTGCT AGAAAACACA GGCGATTTTG TGAACGCTCA TGGTCTGCAG CTAGGTGACT TCATCATGGT TTACCAAGAT CTCTACTCAA ACAATTACGT TATACAAGCA AGAAAGGCAT CAGAAGAAGA AGGAGACGTA ACCAATGTTG AAGAAGACGA CGTTTACACA AACTTAACAA GGATCGAAAA CACGGTCGTT AACGATCTTC TCCTCCAAGA TTTTAATCAT CACAACACCA ACAACAACAA CAACAACAAC AACAGCAACA AATGTTCTTA CTATTATCCC ATCATCGACG ATGTCACTAC AACCACTGGT TCTTTTGTCT ACGACACGAC GGCTTTAACC TCCAACGACA CTCCTCTCGA TTTTTTGGGT GGACATACGA CGACTACTAA TAATTATTAT TCCAAGTTTG GAACATTCGA TGGTTTGGGC TCCGTTGAGA ATATATCTCT CGATGACTTC TACTAGATGA TCAATCGATG GGCTCATGAT GATTGTTAAT GGTGATCAAC TATTTTATTT CCTTATAATA GATACCCTAT AAGAATTAAG TGCATTTGGC ATATATATTA TCAAGTGTTC AGTATTACAT TACAGTTTAT ATGAAAATTA TAGCTAGATG GGAGTCATAT GAAGGTGTGT TGTGTTGTGT TTGATGAATA AATGTTATTT AGTGT 
Length1385
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2922787.. 2925032
Download Sequence
A.thaliana
AGI-codeAT3G26790.1
DescriptionAP2/B3-like transcriptional factor family protein
TAIR curator summaryTranscriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.
Alias[FUS3][FUSCA 3]
Gene coexpression
MR
MR Locus Description
2 Ahg315689
3.87298 Ahg479634 F-box and associated interaction domains-containing protein
5.47723 Ahg315326 Nodulin MtN21 /EamA-like transporter family protein
6.40312 Ahg351609 Protein of Unknown Function (DUF239)
8.12404 Ahg330052
9.69536 Ahg492774 Transducin/WD40 repeat-like superfamily protein
11.4018 Ahg942089
13.2665 Ahg474043 Oleosin family protein
13.5647 Ahg916557
14.1421 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression