Detail



ID : Ahg356638

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356638|fgenesh1_pg.C_scaffold_8000425
Sequence
ATGCCTAAAC CGGGATTCAT ATTTAGGCCG ATTCACGAGT CTCAAGTCCA AGCTTCCATC ATCTGTTCCA AGAAACTCGG TATTCATTTT CGTGTTAGAA GTGGCGGTCA CGATTTTGAG GCCTTGTCTT ATGTTTCACG GATTGAAAAA CCGTTTATAT TACTCGATAT GTCGAAATTG AGACAAATCA CTGTTGATAT TAAAGACAAT AGTGCTTGGG TTCAACCTGG TGCCACGCTT GGCGAGCTTT ACTACAGACG CAAGCTTGTT CCTGTTCCTG AAACCCTAAC CGTCTTCACT GTTACCAAAA CATTAGAACA AGACGCAAGA TTGAAGATTA TTTCTAAGTG GCAACGAATT GCATCCAAGC TTATTGAAGA GCTACACATC CGAGTGGAAC TCAGAGCCAT TGGAAATAAC GGAAACAAGA CTGTGACAAT GTCCTACAAA GGTCAGTTTC TTGGCAAGAA AGGCATCTTG ATGAAGGTTA TGAAGAAGGC TTTTCCAGAG CTAGGGTTGA CTCAAGAAGA TTGTATCGAA ATGAGTTGGA TTGAATCCAC CCTTTTCGGT GGTGGATTTC CAACAGGTTC TCCTATTGAA GTTTTGCTTC AAGTCAAGTC TCCTTTAGGA AAAGGTTACT TCAAAGCCAC AAGAGACGCA CCATTTCTGA ATTGGACTCC TTACGGTGGT ATGATGGCGA AAATTCCTGA ATCTGAGATC CCATTTCCGC ATCGAAACGG AACCCTCTTC AAGATTCTTT ATCAAACGAA CTGGCAAGAG AATGACAAGA GACAGAGTAG ACACATCAAC TGGATCAAAG AGATGTACAG TTACATGGCG CCTTATGTCT CAAGCAATCC AAGACAAGCA TATGTGAACT ACAGAGATCT AGACTTCGGA CAGAACAAGA ACAACTCAAA GGTTAACTTC ATAGAAGCTA AAATCTGGGG AGCTAATTAT TTCAAAGACA ATTTCAACAG ACTGGTGAGA ATTAAAACAA AGGTTGATCC AGATAACTTC TTTAGACACG AGCAGAGTAT CCCAACTCTG CCCGTTTGAA GCTAA 
Length1065
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3174757.. 3177460
Download Sequence
A.thaliana
AGI-codeAT5G44380.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.87401 Ahg948802 Serine protease inhibitor, potato inhibitor I-type family protein
11.0454 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
12.3288 Ahg888179
12.7279 Ahg480427 Protein of unknown function (DUF1645)
19.2873 Ahg472780 FAD-binding Berberine family protein
19.3907 Ahg901565
20.8327 Ahg935423
22 Ahg471510 Protein of unknown function (DUF1262)
26.0768 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
27.2029 Ahg486481 Glycosyl hydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression