Detail



ID : Ahg356702

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356702|fgenesh1_pg.C_scaffold_8000489
Sequence
ATGGAATATA ACCTTCCACT TCCATTAGAG GGTCTCAAAG AAACAGGACC AGCTGCTTTC TTGACGAAAA CCTACAACAT AGTTGAGGAT TCATGCACAA ACAACATAGT TTCATGGAGC AGAGACAACA ACAGCTTCAT TGTCTGGGAA CCAGAGACTT TTGCCCTAAT TTGTCTCCCT AGATGCTTTA AGCACAACAA TTTCTCCAGC TTTGTTAGAC AACTCAATAC TTATGGGTTT AAGAAGATTG ATACAGAGAG ATGGGAGTTT GCAAATGAGT ATTTTCTGAA GGGAGAAAGA CATCTTCTTA AGAACATCAA GAGAAGAAAG ACATCATCTC AAACGCAAAC GCAGTCGCTA GAAGGCGATA GAGTTCGACT GGAAGGAGAG ATCCATGAGC TGAGAAGAGA CAGAGTGGCT TTAGAATTAG AACTAGTGAG ACTGAGACGA AAACAAGAAA GCGTGAAGAC GTATCTGCAT TTGATGGAAG AGAAACTGAA AGTCACAGAA GTGAAGCAAG AAATGATGAT GAATTTCTTG CTAAAGAAGA TTAAGAAACC GAGTTTTTTG CAGAGCTTAA GGAAACGTAA GCTGCAAGGA ATCAAGAATC GAGAGCAAAG ACAAGAGGTG ATCTCAAGCC ATGGTGTTGA GGATCATGAT ACGTTTGTTA AAGCTGAGCC GGAAGAGTAT GGTGATGACA TCGGTGATCA ATTTGGAGGT GTTTTTAGTT ATGGCGATGA GCTTCACATA GCTTCAATGG AGGATCAAGG ACAAGAAGGA GGTGAAATGG AAATGGATAG TGAAGGAATT TGGAAGGGTT TCGTGTTGAG TGAGGAGATG TGTGATTTAG GGGAACATTT TATATAA 
Length867
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3660860.. 3661804
Download Sequence
A.thaliana
AGI-codeAT5G43840.1
Descriptionheat shock transcription factor A6A
TAIR curator summarymember of Heat Stress Transcription Factor (Hsf) family
Alias[AT-HSFA6A][HSFA6A][heat shock transcription factor A6A]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg480711 histone H1-3
4.47214 Ahg934938 Transmembrane amino acid transporter family protein
4.58258 Ahg495299 CAP160 protein
5.47723 Ahg929605 Late embryogenesis abundant protein (LEA) family protein
13.0767 Ahg483270 Remorin family protein
16.9411 Ahg483960 TSPO(outer membrane tryptophan-rich sensory protein)-related
17.2337 Ahg922848 tubby like protein 5
17.8885 Ahg486924 RING/U-box superfamily protein
18.3303 Ahg950674 lipid transfer protein 4
20.347 Ahg487924 CBL-interacting protein kinase 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression