Detail



ID : Ahg358442

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|358442|fgenesh1_pg.C_scaffold_8002229
Sequence
ATGGAGAAGC AAGATTTGGA CAGAGAACTA CGTGAAGCTA TTCCCTGGAT GCTATGGGAG ATTTGGAAGG CGAGAAACTC TTCCATGTAT GCGGCAAAAA CCAACTCTCC ACATTTTGTT GTTGCTACGG TTTTGGAGGA AGCAAAGGAA TGGCTGCAGC AAAATGCTTT ATCTCAACAG GGACATTCTC AAAGGAACCA GAGACAAGCA ATGGATTGTC GAGCGGCTAT TGATGCTTTA GCTACACCGG AGAAGTACCC TAAATATCGT TTTCAGATCA TTAAGATTCA ACAAGTAATA CGGGTGATGC GAGAGACTAA GTTCGTTGAT GGAGTTTCAA CAGTCCAAAG GACATGGTAA 
Length360
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9228604.. 9229128
Download Sequence
A.thaliana
AGI-codeAT5G62410.1
Descriptionstructural maintenance of chromosomes 2
TAIR curator summarySMC2-1 (SMC2)
Alias[ATCAP-E1][ATSMC4][SMC2][TTN3][structural maintenance of chromosomes 2][TITAN 3]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg891439 Ribosomal protein L30/L7 family protein
2.82843 Ahg921734 homolog of Brassica campestris pollen protein 1
6.7082 Ahg493907 arabinogalactan protein 24
8.24621 Ahg896941 tubby like protein 10
9.69536 Ahg483935 Pollen Ole e 1 allergen and extensin family protein
10.198 Ahg941623
11.4018 Ahg925246 F-box associated ubiquitination effector family protein
14.3178 Ahg486699 Cation efflux family protein
15.5885 Ahg894843
15.748 Ahg925665
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression