Detail



ID : Ahg359097

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359097|fgenesh1_pg.C_scaffold_9000137
Sequence
ATGTGGATGT TCAAAATCGA TAACGAAGAG ACAGAAATCA AAATCTTGGG CACGAGCTCT CTCTCCCCTA CACACAGATT TTTTATTCAC CACGTAGGGA AGGATTTGAA CCTAAGTTCA GGTAACAAAA TTCAAGCAGG CATCAAAAAG GAACACATCA GCAAATTCCA GCGTTATGTG AAGAAAGGAG ATTGGAAAAT CATTGATGAT TTCTCAGTTA ATAAAGCAAC GGGACAATAT CGATCAACAA TTCATCCCTA CAGAATAAAT TTCCACTACT CTACTGTCTT CTCTCCCTCA CCATCTATTA ATAATGAGGT TTGGCTTGAT TTAGTTGATT TTACAACTAT TATTGCTGGT AACTTGGATC AAAACAAGTT GGTTGATGTC CTTGGTCAAT TGGTGAATGT TGGAGAAGCG CAAAAGATTG ACGTCCAAGG CAAGCCTACC AAGAAGATTG ATTTTCAGCT GAGAGTCACT GATGATAACC GTCTACCATG CTCACTCTGG GGTAAATTTG CTGACCAAAT TAGCAAAGTT GCGCAAGAAT CTCTTGGTTC TGTCGTTATA GTTTTGGTAA GGCTTCCATC TGATGGACTT GCCTTGACTA TCATGGGACC TAAGCCTAGA TTCCAGCCTC TAAAGGTGCG TGAACAGAGG TCCTTAGGTT TACCTCTAAA GACTATTGCT GAGCTTAAGG CTTCTTATGA GAAAAATGAT CAGCCTACTG ATCTTAAAGT CGATGGTGTC GTTGACTTAG ACAATCCGAA GGAACATGAT CAGCCTAAGT TTCTACACAA ACTTGATGAG GCAGGTCAAG AAGCCATCAC CAAAGTCAGT GAAGCAGAAC AGAAGAAAGT TCTTTTGAAG AAGATTAAGG TTGAGAAGAT CGAAGGTCAG AAGGGAGCAA AGTGA 
Length915
Protein Sequence
Protein Residue
Map Locationscaffold_9: 1482973.. 1487207
Download Sequence
A.thaliana
AGI-codeAT2G35190.1
Descriptionnovel plant snare 11
TAIR curator summaryplant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.
Alias[ATNPSN11][NPSN11][NSPN11][novel plant snare 11]
Gene coexpression
MR
MR Locus Description
33.2265 Ahg479617
36.0694 Ahg316004 Protein of unknown function (DUF1163)
36.8511 Ahg926310
39.2683 Ahg914142
39.3954 Ahg942825 F-box and associated interaction domains-containing protein
39.7618 Ahg924946 SCR-like 8
41.9285 Ahg479186 Plant invertase/pectin methylesterase inhibitor superfamily protein
43.4051 Ahg931796 Maternally expressed gene (MEG) family protein
43.8178 Ahg930067 F-box and associated interaction domains-containing protein
51.0882 Ahg907259
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression