Detail



ID : Ahg359531

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359531|fgenesh1_pg.C_scaffold_346000001
Sequence
ATGACTTCAT TTCCGGTTAC AACCACGGTA TTAGCTGAAC TTAACATCCT TAACTCTGAG CTAGGTCGGT TAGCCACCCA CTGCTCAATG GTCTGCGAAA TTTGTAGCTG GTTCGTCGCT CTCGCGTTTA ATCTCTACAC GCGTGAGCGG ACGATGACTA GCCTTTACGC GATTTTCATG ATCGTAGGTC TTCTTCTGGT GATATATTTC GTCTTTAGAC CTATAATAGT ATGGCTCACC CAGAGGAAAA GCAAATCAAT GGATAAGAAA GACGTTGTAC CGTTCTTCCC GGTCCTCTTT CTTTTATCTG TAGCTAGCCT TAGCGGAGAG GCCATGGGGG TCCATGCTGC GTTTGGAGCG TTTTGGTTAG GCGTTTCTCT CCCTGATGGT CCGCCTTTAG GCACGGAACT TGCTGCGAAA CTCGAGATGT TTGCTTCGAA TTTGTTCCTC CCCTGTTTCA TCGCCATTAG TGGGTTGCAA ACCAATTTCT TTGAGATCAC AGAGAGCCAT GAGCACCATG TGGTAATGAT TGAGATCATT CTCTTGATCA CTTATGGATG CAAGTTCCTT GGAACAGCGG CTGCGTCTGC TTACTGCCAA ACGCAGATCG GAGACGCGCT TTGTTTGGCC TTCTTGATGT GTTGCCAAGG TATCATTGAA GTCTACACTA CTATCGTGTG GAAAGACGCT CAGGTTGTTG ACACAGAATG CTTTAATCTG GTGATCATCA CGATTTTGTT GGTAACCGGG ATTTCGCGGT TTCTCGTCGT GTACCTCTAC GACCCTTCAA AACGTTACAA AAGCAAAAGC AAACGAACAA TCCTCAACAC GAGACAACAC AATCTTCAGC TACGTCTTCT CCTTGGCCTC TACAATGTTG AAAACGTTCC TTCTATGGTG AATCTTCTAG AAGCTACTTA CCCGACACGG TTTAACCCGA TCTCATTCTT TACTTTGCAT CTCGTCGAGC TTAAAGGCCG AGCTCATGCA GTCCTTACAC CGCACCATCA GATGAACAAA CTTGACCCTA ATACGGCCCA GTCCACTCAC ATCGTCAACG CCTTCCAGCG TTTCGAGCAA AAGTACCAGG GAGCTCTCAT GGCGCAACAC TTTACCGCAG CCGCGCCTTA CTCGAGTATA AACAACGACG TATGTACGCT TGCGCTCGAC AAGAAGGCGA CGTTAATTGT GATTCCGTTC CACAAGCAGT ACGCGATTGA CGGGACGGTC GGACAAGTCA ACGGGCCCAT CCGGAACATA AACCTTAACG TGTTGGAAGC GGCACCTTGT TCGGTCGCAA TATTCATAGA CCGAGGAGAG ACCGAGGGAC GTCGCTCCGT GTTGATGACC AATACGTGGC ATAACGTGGC GATGCTCTTC ATCGGAGGCA AGGATGACGC GGAAGCGCTA GCGTTATGCA TGAGGATGGC TGAAAAACCG GACCTTAACG TTACGATGAT ACATTTCCGT CACAAGAGCG CTCTTCAAGA CGAGGATTAC AGTGACATGT CTGAGTACAA TCTAATCTGC GATTTCAAGA GCCATGCAGC GAACAAAGGA AAAGTTCATT ACGTGGAGGA GATAGTGAGA GATGGCGTGG AGACTACACA AGTGATTAGC TCACTTGGAG ATTCCTATGA CATGGTGTTA GTAGGGCGAG ACCATGACCT AGAGTCTTCG GTCTTGTACG GACTCACGGA CTGGAGTGAG TGCCCTGAGT TAGGTGTGAT CGGAGATATG TTGACGTCGC CAGATTTTCA TTTCTCCGTA CTTGTCGTTC ATCAGCAGCA AGGAGACTCA CTGGCCATGG ACGATAGTTA TAAATTGCCT AAAGTCGAGC ATCAGAAGAT TGGAGATACT GGAATGCAAC CACGTTTCTC CGCTGAAGAA GGTTTCACTA CCATTGATCT CGGTAAACAC TAG 
Length1923
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13378895.. 13381086
Download Sequence
A.thaliana
AGI-codeAT2G30240.1
DescriptionCation/hydrogen exchanger family protein
TAIR curator summaryEncodes a plasma membrane localized potassium transporter.
Alias[ATCHX13][CHX13][CATION/H+ EXCHANGER 13]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg476984 pumilio 7
15.5563 Ahg916649
21.6333 Ahg907953
25.5734 Ahg485821 alpha/beta-Hydrolases superfamily protein
25.9037 Ahg908730 GDSL-like Lipase/Acylhydrolase superfamily protein
26.4575 Ahg328000 phytosulfokine 6 precursor
28.4956 Ahg341755 F-box and associated interaction domains-containing protein
43.4051 Ahg912773 Transducin/WD40 repeat-like superfamily protein
45.0111 Ahg902925 Tetratricopeptide repeat (TPR)-like superfamily protein
45.0555 Ahg896274
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression