Detail



ID : Ahg359723

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359723|fgenesh1_pg.C_scaffold_801000001
Sequence
GCCCTAAACT ATACGATAGA TTTGATTCTC TCGCATGAGG AAAAGAACTC TTCAGATACT GAAAACGATA GTGAAGTAAA TCTCTTTGCT ACAGAAGCAT TTGGTAAGAT CTTTGAAGGC TTAGCAGATT GTTTGACTTC TCCCAGAAAG ACATCAGAGG ATCTGGAATT ATGTCGGAAT GTAATAATGA TCTTGGCCTT AGCAGCTTCT TCAGGAAACT CTGGCTATGA ACTGCTCTCA AATCACAAAC TACCTCAAGA TACCAACTTT TTAATGGTGA TACTTCATCT TTTAGTTGCA GAAATAGACT CGGAATCAAC AGAGTTTCGT CCAAAAGCGG AAATCTTGAA AGCGAGGACA TTATTGATGA GAGAGATACT GATATTACTA AACAGACTTG TCTCTGGCTT GTCAAGCTCT GCTACTATTC TAAAAGAACT AACAAAGAGC AGAGACATGG CGAGTCTAAC AGTTGATGCA GCCACAAGAT TATCCCGTAA AAGAAACTTA CTAGGACAAC CTGAAAACAG TGTTCAGAGA ATGAGGAATA CAGAAATCAT GGATTTAGCC CGCATTTTCA AGAGACGGGT TTTCGCCTTC TTAGGCGACA ATACTATATA A 
Length621
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1491022.. 1491809
Download Sequence
A.thaliana
AGI-codeAT5G45610.1
Descriptionprotein dimerizations
TAIR curator summaryEncodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response.
Alias[SUV2][SENSITIVE TO UV 2]
Gene coexpression
MR
MR Locus Description
46.3789 Ahg347073
49.558 Ahg933673 inhibitor-3
63.9922 Ahg894704 Major facilitator superfamily protein
67.1342 Ahg470930 threonine aldolase 1
89.0955 Ahg923138
97.5602 Ahg925985 DNA-binding HORMA family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression