Detail



ID : Ahg470069

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470069|fgenesh2_kg.1__23__AT1G02065.1
Sequence
TTTCTTTCTT CTCCATCTTC ACTTTTTTTA AGTAGAGGAC AAGACAGACA GCTACCTCTA AAAAAAAATG AATTAAAAAG GGACATTTAA GAGAGATGGT GAGAGAGAGC AATAGAGAGA GAGAGAAGGA GCTCCACCCA CAAATAGAAA AGTTAGGGTT TACTGGAAAG AAAGAAAGAT GATTCTAATA GAGGTGTAGT ACGTCGCTTT GCTTTCAGTC CATTAAAACC ATTCCATAAC CTATTCCGCA CCGACATGTC TCCTCTCCCC TTCCTTTATT AGCCTCTCTT TTTATAAACA AATTAAAAAG AAAGAGAGAG AGATCTTCCT CGGGATTGCA ACATGCTGGA CTACGAATGG GATAATCCTT CCTCGCTTGT TCTCTCCGGA GATGAAAGAA ACCCGGACTC TGACCCGACG ACCCGATCCT CCCTCTCCTT TTTCGACCCC GTCTCTCATT ACAACAACGA CCACCGCCAC ATCACCATTT CTCCTCCCCT CCTCTCTTCC TTCTCTAATA ACCAGCAGCA ACATCACCTC ACCCTCTACG GTCAGAGCAG CAGCAACAAC AACCTGTTGT TTCATCATCA TCACCTGTAC GACCCACGCA CCACCACTCC TTACGGCGCC TCCGATCCCA TGTACCATCC CCACTCTTCC GCTCCAGCCT CCTTGTTCTC CTACGACCAG ACCTCGGGAT CCGGATCTTC CTACAACTTC CTCATCCCCA AGACAGAAGT GGATTTCACG TCCAACAGGA TCGGGCTGAA TCTGGGAGGC CGTACGTACT TCTCAGCCGC GGACGACGAC TTCGTGAGCA GGCTGTACAG GAGGTCCAGA CCAGGTGAGT CAGGGATGGG GAACTCGCTG AGCACGCCGC GGTGCCAAGC CGAGGGATGC AACGCGGATC TGAGCCACGC GAAGCACTAC CACCGCCGGC ACAAAGTGTG CGAATTCCAC TCAAAAGCAT CGACGGTTGT AGCCGCCGGA CTAAGCCAGA GGTTTTGCCA GCAGTGCAGC AGGTTCCATT TGCTGTCGGA ATTCGACAAC GGGAAACGGA GCTGCCGTAA GCGACTTGCT GACCATAACC GCCGCCGCCG TAAATGTCAC CAATCTGCCT CCGCCACCCA AGACGCCGCC AAGCCAACTC CAAAGTCACC GAAGGATTCT GGTGTAAAAG CGTCTCCGTC GCCGTCCAAC GCGCCGACTA CGATATCACT GGAGTGCTTC CGGCAAAGGC AGTTCCAAAC GACAGCGTCG TCTTCCACGT CAGCGTCTTC CTCCTCAAAT TCAATGTTTT TCTCAACCGG ATAGAAGGAC TCTTCTTCGG TAGCTGCTAT CATCTGAATT AGTCG 
Length1355
Protein Sequence
Protein Residue
Map Locationscaffold_1: 62119.. 64012
Download Sequence
A.thaliana
AGI-codeAT1G02065.1
Descriptionsquamosa promoter binding protein-like 8
TAIR curator summaryEncodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.
Alias[SPL8][squamosa promoter binding protein-like 8]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg932829
10.198 Ahg945048
10.4881 Ahg494580 RmlC-like cupins superfamily protein
18.8944 Ahg906792
26.0768 Ahg359114 transposable element gene
26.1725 Ahg485911 Papain family cysteine protease
26.3818 Ahg475096 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
29.4788 Ahg477951 GNS1/SUR4 membrane protein family
34.3511 Ahg319606 U-box domain-containing protein kinase family protein
38.6264 Ahg923962
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression