Detail


ID : Ahg470205

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470205|fgenesh2_kg.1__159__AT1G02450.1
Sequence
TCTTCGCTCT CCAAAATCAT TCACTTTCTC AATGTATCCT AAACAATTTA ATTTATACAA TTACTCCATA GAGACCATGA ACAAGGAAGA GAATGTGGAG AGCAAGGAGA CGATCAGGGT CGATAAGAGA GTAAGAGAAG ACGAAGAGGA AGAAGAAGAG AAGAAGATTG ATACGTTCTT TAAGCTTATC AAACACTATC AAGAAGCACG AAAACGTAGA CGAGAAGAGT TAGCTGAAAA TTCCGGCGGG GTGAGGAGGA AATCTAACAG CGGAGAAAGA TCCGGTCTAG TAGTTCCGGC GTTTCAGCCG GAGGATTTCT CTCAGTGTCG TACGGATTTG AAGCCGCCAT TGATGATTGT TTCGGATCAC AAGGAAGAAG ACACAAAGGT TAAAGAAGAA GAAGAAACAG AAGAGAAGGC TTTAGATCTT AATCTTGCAT TGTAGTAG
Length448
Protein Sequence
Protein Residue
Map Locationscaffold_1: 581993.. 582438
Download Sequence
A.thaliana
AGI-codeAT1G02450.1
DescriptionNIM1-interacting 1
TAIR curator summaryNIMIN1 modulates PR gene expression according the following model: NPR1 forms a ternary complex with NIMIN1 and TGA factors upon SAR induction that binds to a positive regulatory cis-element of the PR-1 promoter, termed LS7. This leads to PR-1 gene induction. NIMIN1 decreases transcriptional activation, possibly through its EAR motif, which results in fine-tuning of PR-1 gene expression.
Alias[NIMIN-1][NIMIN1][NIM1-interacting 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg321761 WRKY DNA-binding protein 54
4.47214 Ahg936277 NIM1-interacting 2
5.65685 Ahg486111 sigma factor binding protein 1
5.65685 Ahg496228 Heavy metal transport/detoxification superfamily protein
11.4891 Ahg946052 receptor kinase 3
12.6095 Ahg486080 WRKY DNA-binding protein 70
16.4317 Ahg494402 Leucine-rich repeat protein kinase family protein
23 Ahg482807 Neutral/alkaline non-lysosomal ceramidase
28.5307 Ahg494546 FAD-binding Berberine family protein
31.7017 Ahg488150 Auxin-responsive GH3 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression