Detail


ID : Ahg470372

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470372|fgenesh2_kg.1__326__AT1G03960.1
Sequence
CTTTGATAAC TTTCCGGCGA AATCTATCTT TTTTTTTTGC CGATTAGTGA TCGGAATTGC TTGTTCGTTC AACTGCCAAC TTCTTTCCTA CTCGGTGCAG GAATCTTACT ATTCCAATCA CTTGTCTATT TCTGGAAACA AATCGTCACT GATTTTGTAT CAAATTCGAA AACTAGGGTT TATCGAATCG GGTTGACACA GTAGCGTCGT CTTTTCGTAG CCGCTGTTGT CGAAATTTGA ATTTCTCGAT TTTCGCGGCG GTTTTGTTAC TCCAATTGAT TCAAGGAGTT TGAAGGAGTA GGGTTTCTCG TTGCGAATAA GCAGGAGATC ATGGATATTG ACGGAGTAGA CGATGTTCAT ATTTTAGATC CTGAGCTCTT GCAGCTCCCC GGTTTATATC CTGCTCCGCT CAAGCCAAGC TCTCATATTG CCGATGAACT CTTCTCTCAG TGGCTCTCAC TCCCTGAAAC TGCCAGATTG GTCAAGTCTT TGATTGATGA TGCTAAATCT GGAACACCAA CTAATTTATC CAAGAATTAT GCCACCACTG ATGTTTCCGG TGGAAGTGCT TTGCCTGCTG TGTTTCTGAG CAGCAGCACT CCCCCGCTAT CTCCACGAAG CTCGTCTGGG TCCCCTCGTT TCTCGAGGCA AAGGACTAGC CCTCCTTCTC TCCAGTCTCC TCTGCGATCA TTCAAGGAGC CCAAGCATGA ACTCATTCCT CAGTTCTACT ACCAACACGG GCGTCCACCA GCAAAAGACC GAAAGGAACA GTGTATATCC ATGGTTGATC AATTTTTTAG AAACTATATT GATGGACTAC ATGTAGATGA GTTCAAATCC ATTACGAAAG AAGTCTGCAA GCTGCCTTCT TTTCTCTCTC CTGCACTTTT CAGAAAGATC GATCACAATT GCACTGATAT AGTTACAAGG GATGCGTTTA TCAAGTATTG GATTGATGGA AATATGTTAA CTATGGACAC AGCCTCCCAG ATATATAATA TACTAAGGCA GCAGGGCTGC AAGTACCTCA GACAGGCAGA CTTCAAACCA GTTCTTGATG AGCTTCTGGC AACACATCCT GGGTTAGAAT TTCTGAGGAC GACAAGCGAA TTTCAAGAAA GATATGCTGA AACTGTCATC TACAGAATAT TTTACTACAT TAACAGATCC GGAACTGGTT GCCTTACTCT TAGAGAGCTG AAACGTGGAA ATCTAATTGC TGCTATGCAA CAACTTGATG AAGAGGACGA CATCAATAAA ATTATTAGGT ACTTCTCCTA TGAGCACTTC TACGTCATAT ACTGCAAATT TTGGGAACTT GATGGTGACC ATGATTGTTT AATTGATAAG GACAATCTCA TCAAATATGG TAATAATGCC CTTACCTACA GGATTGTTGA TAGAATATTT TCACAGGTTC CTAGGAAGTT TACGAGTAAA GTTGAAGGGA AGATGAGTTA TGAAGATTTT GTGTACTTCA TTCTCGCCGA GGAAGACAAG TCTTCCGAGC CTAGTCTTGA GTATTGGTTC AAGTGTGTAG ACTTGGATGA AAATGGCGTA ATCACTCCAA ACGAAATGCA GTTTTTTTTC GAAGAGCAGC TGCATCGCAT GGAATGCATA ACCCAGGAAG CTGTTCTTTT CAGCGATATC CTATGTCAAA TAATTGACAT GATTGGACCC GAGAAAGAAA ACTGCATCAC CTTCCAGGAT CTGAAAGGAT CCAAACTTTC AGGAAACGTC TTCAATATAC TCTTCAACCT AAATAAATTC ATGGCATTTG AAACACGTGA CCCATTTCTC ATTCGCCAGG AAAGGGAGGA TCCAAATTTG ACAGAGTGGG ATCGATTCGC TCAGAGAGAG TATGTGAGAT TGTCAATGGA GGAAGATGTA GATGAAGTCT CAAATGGGAG TGCAGATGTC TGGGATGAAC CACTCGAACC TCCATTTTAG TCCATAGTG
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1163578.. 1167528
Download Sequence
A.thaliana
AGI-codeAT1G03960.1
DescriptionCalcium-binding EF hand family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg476282 other RNA
12.6491 Ahg939293
21.9773 Ahg497293 UB-like protease 1A
30.545 Ahg481908 alternative NAD(P)H dehydrogenase 2
32.249 Ahg941896 DNA binding;DNA-directed RNA polymerases
37.229 Ahg354576
37.4566 Ahg927464 BRCT domain-containing DNA repair protein
40.6817 Ahg485300 Transducin/WD40 repeat-like superfamily protein
41.9524 Ahg314047 Transducin/WD40 repeat-like superfamily protein
43.589 Ahg925800 calmodulin 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression