Detail


ID : Ahg470398

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470398|fgenesh2_kg.1__352__AT1G04220.1
Sequence
GTCTCGTTAC CTTTGATTAT CATTTAAAAC CAAAAGACTA CCATGAAGGA GAATCACATT CAAAGTGATC ACATGAACAA CACCATTCAC GTAACAAACA AAAAACTCCC AAACTTCCTC TTATCGGTAC GCCTTAAATA CGTTAAACTC GGTTACCATT ACCTAATCTC TAATGCCGTC TACATCCTCA TCCTCCCTGT CCTCCTCGCC GCAACCTCCT CCTCCTTCAA TCTCTCCGAT CTCACACTCT TATACAACCA CCTTCTCAAA TTCCACTTCC TCTCTTCCAC TATATTCGCA GCCCTTCTTA TCTTTCTAAC CACCCTCTAC TTCACAACTC GTCCTCGCAA GATATTCCTC CTCGATTTCG CTTGTTACAA ACCCGACTCT TCTCTAATAT GCACACGAGA AACGTTCATG GACCGGTCTC AACGTGTTGG TATCTTCACA GAAGACAACC TCGCTTTCCA ACAAAAGATC CTCGAACGCT CCGGTCTTGG ACAAAAAACT TACTTCCCGG AGGCTCTCTT ACGTGTCCCG CCGAATCCTT GTATGTCTGA AGCAAGGAAA GAAGCCGAGA CGGTTATGTT TGGAGCTATA GACGCAGTGC TTGAGAAAAC AGGAGTGAAG CCTAAGGATA TTGGGATACT TGTGGTGAAT TGTAGCTTGT TTAATCCGAC GCCTTCCTTA TCAGCTATGA TCGTGAATAA ATATAAGCTT AGAGGAAACA TTTTGAGCTA TAATCTTGGT GGGATGGGTT GTAGTGCTGG TCTTATCTCC ATTGATCTCG CTAAACAGCT TCTTCAGGTC CAACCAAATT CATATGCACT AGTAGTGAGC ACAGAAAACA TAACCCTAAA CTGGTATTTA GGCAACGACC GATCAATGCT TCTCTCAAAC TGTATCTTCA GAATGGGTGG CGCAGCCGTT CTCCTCTCTA ACCGCTGCTC CGACCGCCGC CGCTCCAAAT ACCAACTCAT CCACACCGTC CGTACCCACA AAGGAGCTGA CGACAACGCC TTTAACTGCG TTTACCAACG CGAAGACAGC GACGACAACA AACAAATCGG TGTCTCACTT TCCAAAAACC TAATGGCTAT AGCCGGAGAA GCTCTCAAGA CGAACATAAC CACTCTCGGA CCGCTAGTCC TTCCAATGTC CGAACAACTT CTATTTTTCG CAACACTCGT GGCGCGAAAA GTCTTTAATG TGAAGAAAAT CAAACCTTAT ATTCCTGATT TCAAGCTAGC ATTCGAGCAC TTCTGCATCC ACGCGGGAGG CAGAGCAGTG CTCGATGAGA TTGAGAAGAA TTTGGATCTT TCTGAGTGGC ATATGGAGCC TTCTCGGATG ACTTTGAACC GGTTTGGGAA TACTTCGAGT AGCTCGCTGT GGTATGAGCT TGCGTATAGT GAGGCTAAAG GAAGGATTAA GAGAGGAGAT AGGACTTGGC AGATTGCTTT TGGGTCGGGT TTTAAGTGTA ATAGTGCGGT TTGGAGAGCT TTGAGAACTA TTGATCCGTC CAAGGAGAAG ACTAATCCAT GGATTGATGA GATTCATGAG TTTCCGGTGC CCGTTCCCAG GATATCTCCG GTGACATCTT CGTCGGAATC TCGATAGTT
Length1619
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1274396.. 1277338
Download Sequence
A.thaliana
AGI-codeAT1G04220.1
Description3-ketoacyl-CoA synthase 2
TAIR curator summaryEncodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS2][3-ketoacyl-CoA synthase 2]
Gene coexpression
MR
MR Locus Description
2 Ahg917675 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
12 Ahg926219 ABI five binding protein
34.641 Ahg325294 Late Embryogenesis Abundant 4-5
39.4208 Ahg920436
44.0908 Ahg496967 Dehydrin family protein
71.3442 Ahg474944 P-loop containing nucleoside triphosphate hydrolases superfamily protein
80.1499 Ahg895588 myb domain protein 74
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression