Detail



ID : Ahg470412

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470412|fgenesh2_kg.1__366__AT1G04350.1
Sequence
TTTCTTGATA ACGTTCTTCT TCTTCTTCTT CTTCTTGTAT ATGAACCAGC CTTTTGTGAA TGAAATCTTA AAATAGGTTG TAGAAACATA AATGGCGACC AAAGATATCG ACTCTTACAG TGAGCGCAAA GCTTTCGACG AGACAAAAAC AGGTGTGAAA GGTCTTGTTG ATGCTCACAT CACTGAGATT CCTCGAATCT TCCGTCTCCC TCAAGGTGTC TTCTTATCCG ACAAGAAAAC TTCTGTCTCT GCCTCGGATT TTGCGATCCC TATCATCGAC TTTGAAGGCC TCCACGTCTC GCGTGAAGAT ATCGTCAAGA AGATCAAAGA CGCTGCATCC AATTGGGGGT TTTTCCAGGT GATTAATCAT GGTGTTCCTT TAAACGTTCT TGAAGAGATT CAAGAAGGAG TTCGTAGGTT TCATGAAGAA GATCCTGAGG TTAAGATAAC TTACTTCACC CGTGATGCCG CTAAAAGATT TGTCTACAAT AGTAACTTCG ATCTCTACAG GTCTTCTTCA TGTGTTAACT GGAGAGACTC GTTCGCTTGT TACATGGCTC CTGATCCTCC AAACCCTGAG GAACTCCCAG TGGCTTGCAG GGATGCTATG TTCGAATACT CAAAGCATAT GATGAGATTA GGTGATTTGC TCTTTGAGCT TCTCTCAGAA GCTCTTGGTT TGAGATCTGA TAAGCTTAAG AGCATGGATT GCATGAAGGG TTTGCTTTTG CTCTGCCATT ATTATCCTCC ATGTCCACAA CCTGATCTAA CTATCGGCAC AAATAATCAT TCAGACAATT CCTTCCTCAC AATTCTTCTT CAGGACCAAA TCGGTGGTCT TCAAATTCAT CATCAGGACT GTTGGGTCGA TGTCTCTCCT ATTCCAGGGG CTCTAGTCAT CAACATGGGA GATTTCTTGC AGCTAATAAC GAATGACAAG TTCATAAGTG TGGAGCATAG GGTGCTAGCG AACAGGGCAG CTACACCGAG GATATCAGTA GCGAGCTTTT TCAGCACAAG TATGCTTCCG AATTCAACTG TTTACGGACC AATCAAGGAG ATTCTCTCTG AAGAAAACCC TCCAAAATAC AGAGTCATCG ACTTAAAAGA ATACACAGAG GGGTACTACA AGAAAGGCCT CGATGGAACA TCGTATCTGT CGCATTACAA GATATGAAAA AAAAAACACT TGAAATGAGT AAATCAGCTC AGGTTTATTG TAAGATATTG GTGTGTTTCA TGCATCTAAA AAACAAAAAG AACAAAGAAT GTATCATTTT AGTGAATGCT TTAAATTGGG TATAAAGGTT CAAACTTGAT CAGC 
Length1324
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1327891.. 1329436
Download Sequence
A.thaliana
AGI-codeAT1G04350.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg926152 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
14.5945 Ahg478469 Duplicated homeodomain-like superfamily protein
16.4317 Ahg949748 GroES-like zinc-binding alcohol dehydrogenase family protein
17.3781 Ahg491946 RING membrane-anchor 2
22.4499 Ahg930354 XB3 ortholog 5 in Arabidopsis thaliana
24.5764 Ahg487551 RHOMBOID-like protein 3
28.9828 Ahg900004
34.0734 Ahg489182 DNAJ heat shock N-terminal domain-containing protein
35.1568 Ahg895882 TRAF-like family protein
36.6333 Ahg483757 Nuclear transport factor 2 (NTF2) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression