Detail


ID : Ahg487551

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487551|fgenesh2_kg.6__685__AT5G07250.1
Sequence
ACAGAGGAGA GAGAGATCAC TATGGCTGTC GGAGATGATG ATCTGGAGAA CCGAATGTCA GCGAAGGATC GAGGGATCGG TAGCAGAGGC GGTGATCGGA ATCGAATCGG ACCGCCTCCT TTGCCGGTAG CGTTGTCGTC GTCTACTGAA TTTGGCGATA ACGCGTTGTC GTCGCGGTGG ACGTCGTGGC TTTTTCCGAT GTTCGTTGTG GCTAACGTTG CGATTTTCGT CGTGGCGATG TTCGTCAACA ACTGTCCGAA GCATTTCGAG TCTCACCGTC TTAGAGGTAA CTGTGTCGCC AGGTTTCTCG GTAGACTCTC GTTTGAGCCT CTCCGAACTA ATCCTCTCTT TGGTCCGTCT TCTCACACTT TGGAGAAGTT AGGAGCACTT GAGTGGAGCA AAGTTGTGGA GAAGAAGGAA GGTTGGCGTC TCTTGACATG TATATGGTTG CACGCCGGTG TTATTCATCT CGGAGCCAAT ATGCTAAGCC TCATATTCAT CGGTATTCGC CTCGAGCAGC AATTTGGTTT TGTTAGAATA GGAGTTATAT ACCTATTTTC GGGAATTGGA GGGAGTGTAC TGTCGTCGTT GTTTATCAGA AACAGTATCT CGGTTGGAGC TTCTGGTGCT CTTTTTGGCC TCCTTGGCTC AATGCTTTCT GAACTTTTCA CTAACTGGAC AATCTACTCT AACAAGATTG CAGCACTCCT GACCCTTTTG TTTGTCATCT TGATAAACCT GGCTATCGGG ATTCTGCCTC ACGTTGATAA TTTTGCTCAT GTGGGTGGAT TTGTAACGGG TTTTCTCCTC GGTTTCATTC TCCTGGCTCG TCCCCAGTTC AAGTGGTTAG CAAGAGTGCA CATGCCACAA GGGACACCTC TGAGATACAA GTACAAGCCT TACCAATACC TATTGTGGCT CTTATCTCTG GTTCTATTGA TTGCCGGATT CGTGGTGGCG TTGTTGATGC TATTTCGAGG AGAAAACGGC AATGATCACT GCCGCTGGTG TCGCTACCTG CGCTGTGTAC CCACCTCAAG TTGGAGGTGT GATGATATCT GATAAGTAAA GCAACATGTT TTACTTTGTA AATGCATATA TAGGTTTATC ATGTCATTTT ATAGTGTTTC AGTGTAATTG TGTGATTGCT TATGTGTGCG ACTCTTATTG AGCTTTTTTA CCGGAAAGAA AAAGAGGAAG ATATTAGTTT AATATGAAAG GTTATATCAA TC
Length1232
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2686089.. 2687848
Download Sequence
A.thaliana
AGI-codeAT5G07250.1
DescriptionRHOMBOID-like protein 3
TAIR curator summary
Alias[ATRBL3][RBL3][RHOMBOID-like protein 3]
Gene coexpression
MR
MR Locus Description
24.5764 Ahg470412 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
57.6455 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
71.6519 Ahg480976 SAUR-like auxin-responsive protein family
80.05 Ahg476957 Chaperone DnaJ-domain superfamily protein
81.7557 Ahg496088 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
87.5785 Ahg325322
95.8332 Ahg486577 peroxin 11E
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression