| Annotation |
|---|
| Description | jgi|Araly1|470571|fgenesh2_kg.1__525__AT1G05670.1 |
| Sequence |
AAAAGATGAA AGAAGGATCT CATGTTATCG TTTTGCCTTT CCCAGCACAA GGCCACATAA CTCCAATGTC CCAATTCTGT AAACGCTTAG CCTCAAAAGG TCTTAAGCTC ACTCTTGTCC TCGTTTCCGA CAATCCCTCT CCGCCATACA AAACAGAGCA CGACTCAATC GCTGTCGTCC CCATCTCCAA TGGTTTCGAA GAAGGTGAGG AACGATCACA AGACCTAGAT GATTACATGG AAAGAGTGGA AGCCAGCATC AAAAACAGCT TACCGAAGCT GATAGAAGAC ATGAAACTGT CGGGAAATCC TCCTAGGGCT CTCGTGTACG ACTCCACCAT GCCGTGGCTT CTTGATGTAG CTCATACTTA TGGTTTGAGC GGTGCCGTGT TTTTCACGCA GCCTTGGATT GTCTCAGCTA TTTACTATCA TGTTTTCAAA GGCTCGTTCT CTGTACCGTA TACAAAGTAC GGTCACTCAA CGTTAGCATC TCTCCCTTCG TTCCCGATGC TAAATGCAAA TGATTTGCCG TCTTTCCTCT GTGAATCGTC CTCTTACCCA TATATACTAA GGACTGTGAT CGATCAGCTC TCAAACATTG ATCGAGTTGA TATAGTTTTA TGCAACACCT TCGATAAATT GGAAGAAAAG TTGCTGAAGT GGGTCCAAAG CGTGTGGCCT GTCCTGAACA TAGGACCAAC TGTTCCATCA ATGTATTTAG ATAAGCGACT GCCTGAAGAC AAAAACTACG GATTCAGCCT TTTCGGTGCG AAAGTCGCTG AATGCATGGA GTGGCTAAAT TTAAAGCAGC CTAGTTCAGT TGTTTATGTA TCATTTGGTA GCTTGGTGGT TCTAAAAGAA GATCAACTGA TAGAACTCGC GGCGGGTCTG AAACAGAGCG GCCATTTCTT TTTGTGGGTT GTGAGAGGCG GGGAGAAAAA CAAACTTCCA GAAAACTATA TAGAGGAAAT TGGTGAGAAA GGACTGATCG TGAGCTGGAG TCCACAACTT GAAGTTCTTA CACATAAATC GATCGGTTGT TTCTTGACAC ATTGTGGATG GAACTCGACG TTAGAGGGAC TGAGTTTGGG AGTTCCAATG ATTGGTATGC CACATTGGGC AGATCAGCCC ACAAATGCTA AGTTCATGGA GGATGTGTGG AAAGTTGGGG TTAGGGTTAA AGCAAACGGT GATGGGTTCG TGAGAAGAGG AGAGATTGTG AGACGTGTGG GAGAAGTTAT GGAGGGAGAG AAAGTTCCAA AACGCATCGT TTCGTTCGTT AAAATGACCG TTCGCAAATA CGATGTCGTT TCAACCAAAA TCCCAAAATC GATCGTCGTC TTCAATCGCA CGCCGTGCCC TTCATTTTCA GATTTCTCAA CTTTAACCGA TACTAGACCT TTTCCTGATT ATTCACCAAA GAAATCTTCA GTGAGAGACA CTGAGTTTGT ACATCAAATC ACCAATGTGA TTAAGCTGCG TCGGGCTGAG CCTCTGAGGC GGAGTTTAAA GCCTTATGAA TGCAAGTTCA AGACTGATCA TTTGATTTGG GTTCTGATGA AGATTAAGTG TGATTACAGG TTGGTTCTTG ATTTCTTTGA TTGGGCTCGC TCCCGCAGAG ACTCCAACCT TGAATCCCTT TGCATTGTTA TTCATTTGGC TGTGGCGTCT AAGGATCTAA AAGTGGCTCA GTCTCTCATT AGCAGTTTTT GGGAGAGACC AAAGTTGAAT GTTACTGAAT CCTTTGTACA GTTTTTTGAT CTTTTAGTAT ATACTTACAA GGACTGGGGT TCGGATCCTC GTGTATTCGA TGTTTTCTTC CAAGTACTCG TCGAATTCGG AATGCTCCCT GAGGCGAGAA AAGTCTTTGA GAAGATGTTG AATTACGGAT TGGTTTTATC TGTTGATTCT TGCAACGTAT ACCTTGCCCG TCTTTCGAAA GATTGCAATA AAACTGCAAC AGCAATTATA GTGTTCAGGG AATTTCCGGA AGTGGGTGTT TGTTGGAATG TTGCTTCTTA TAACATCGTT ATTCATTTTG TTTGTCAACT TGGGAGGATA AACGAAGCCC ACCATCTACT CCTGCTTATG GAGTTGAAGG GCTACACCCC TGATGTAATC AGTTACAGTA CAGTGATAAA TGGATATTGT AGATTTGGGG AACTTGACAA GGTTTGGAAG CTCATTGAAG AAATGAAACA GAAGGGCCTG AAGCCGAATT CTTATACTTA TGGTAGTATA ATTGGTTTGC TCTGCAGGAT TTGTAAGCTA GCCGAAGCAG AGAAGGCTTT TTCAGAGATG ATAGGGCAGG GCATACTTCC TGACACTATA GTGTACACAA CTCTTGTTGA TGGTTTCTGC AAGCGAGGGG ATATCCGGGC TGCATCGAAG TTTTTTTATG AGATGCACTC TCGGGATATT ACACCAGATG TTTTGACATA TACTGCTATT ATATCAGGGT TTTGTCAGAT TGGCGACATG GTGGAGGCTG GTAAACTATT TCATGAAATG CTTTGCAGGG GTTTAGAGCC GGATATCATT ACTTTTACTG AACTTATGAA TGGATACTGC AAAGCAGGGC ATATAAAAGA TGCTTTTAGG GTCCACAATC ACATGATTCA GGCTGGGTGC TCCCCAAATG TTGTTACATA CACCACATTA ATTGATGGGC TTTGTAAGGA AGGGGACTTA GATTCAGCGA ATGAACTTCT CCATGAAATG TGGAAAATAG GTCTTCAGCC AAATATTTTT ACTTATAATT CCATTGTCAA TGGTCTATGT AAGTCGGGTA ATATCGAGGA GGCAGTTAAA CTCGTTGGAG AATTTGAAGC TGCGGGACTT AATGCAGACA CTGTAACTTA TACAACCTTA ATGGATGCCT ACTGTAAATC AGGGGAGATG GATAAGGCTC AAGAGATTTT GATGGAGATG CTCGGGAAAG GGCTTCAACC TACTATTGTC ACGTTCAACG TTCTAATGAA TGGTTTTTGT TTGCATGGGA TGTTGGAAGA TGGTGAGAAG CTATTAAATT GGATGTTGGC AAAGGGTATA GCGCCTAATG CAACCACATT TAATTCTCTC GTGAAGCAAT ATTGCATTAG AAATAACCTG AAGGCAGCAA CTGCAATTTA TAAAGACATG TGTTCGCGGG GAGTAGAACC TGATGGTAAG ACGTATGAGA ATTTAGTTAA AGGCCATTGC AAAGCTAGGA ACATGAAGGA AGCATGGTTT TTATTCCAAG AATTGAAAGG GAAAGGATTT AGTGTCTCTG TCAGCACATA CAGCGTTCTC ATCAAAGCAT TCTTCAAGAG GAAGAAATTC GTGGAGGCGA GAGAAGTTTT TGACCAAATG AGAAGAGATG GATTAGCTGC GGATAAAGAA ATTTTTGACT TTTTCAGTGA TACAAAATAC AAGGGCAAGA GGCCAGATAC AATTGTAGAT CCTATTGATG AAATAATAGA GAATTGCCTT GTAGATGAGC AACTAAGGGA AGCCAATTAG |
| Length | 3500 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 1910512.. 1917079 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G05670.1 |
| Description | Pentatricopeptide repeat (PPR-like) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 38.4578 |
Ahg477013 | Terpenoid cyclases family protein |
| 56.0535 |
Ahg484914 | transposable element gene |
| 72.0763 |
Ahg350409 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein |
| 74.8398 |
Ahg901222 | homeobox-3 |
| 77.7689 |
Ahg946268 | Protein of unknown function (DUF594) |
| 87.5443 |
Ahg323966 | |
| 94.689 |
Ahg491480 | Pentatricopeptide repeat (PPR) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|