Detail



ID : Ahg470629

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470629|fgenesh2_kg.1__583__AT1G06140.1
Sequence
ATGCTTCCGG TGAACAGAAA CAGAGCTCTT TTAACAATCT TGAGCCAAAC CAAAACACTA CACCATACTC AGCAAGTTCA CGCCAAGGTC ATAATCCATG GATTCCAAGA TGAAGTTGTT CTCGGATCCA GTCTCACTAA CGCTTATATC CAATCGAATC GTCTCGATTT CGCTACTGCT TCATTCGATC GAATCCCTTG TTGGAAGAGG AATCGGCATT CGTGGAACAC GATTCTCTCT GGTTACTCCA AATCCAAGAG TTGTTATTAT AGCGACGTCT TGCTTCTTTA CAATCGCATG AGAAGGCATT GTGATGGCGT CGATAGTTTC AATTTGGTAT TTGCGATCAA AGCTTGTGTT GGTTTAGGGC TTTTAGAAAA TGGTATGCTG ATTCATGGCT TGGCGATGAA GAATGGGTTG GATAAAGATG ATTATGTTGC TCCGTCGTTG GTTGAGATGT ACGCACAGTT CGGTACTATG GAAAGTGCGC AGAAGGTGTT CGACGAAATT CCTGTGAGAA ATTCAGTTCT TTGGGGAGTT CTGATGAAAG GATATTTGAA ATACTCGAAA GACTCAGAAG TGTTTCGTTT GTTTTATCTC ATGAGAGACA CTGGTTTAGC GCTCGATGCG CTTACGTTGA TATGTTTGGT AAAGGCTTGT GGGAATGTTT TTGCTGCTAA AGAAGGAAAG TGTGTGCACG GATTATCCAT TAGAAGGAGC TTCATAGATC AGAGTGGTTA CTTAGAAGCC TCCATCATAG ATATGTATGT GAAATGTAGA TTGTTGGACA ATGCTCGAAA ACTATTTGAA ACAAGTGTTG AAAGGAATGT GGTGATGTGG ACTACGCTGA TTTCTGGGTT TGCAAAGTGT GAGAGAGCTG TTGAAGCAAT TGATCTATTC AGGCAGATGC TAGGAGAATC GATACTTCCA AATCATTGTA CTTTGGCGGC CATTCTTGTT TCTTGCTCGA GCTTGGGATC TCTGAGGCAC GGGAAAAGTG TTCATGGCTA CATGATAAGG AACGGGATTG AAATGGACGC CGTGAATTTC ACATCTTTCA TCGATACATA TGCTAGATGC GGGAATATAC AGATAGCTCG GAAGGTTTTC GACATGATGC CGAAGAGAAA TGTGATATCT TGGAGCTCAA TGATCAATGC TTTTGGGAGA AATGGTCTGT TCGAGGAAGC TCTGGATTGT TTTGATAACA TGAAGTCACA AAACCTAGTT CCCAATTCTG TGACATTTGT TTCGCTTTTG TCGGCCTGTA GCCATTCGGG AAACGTCAAA GAAGGATGGA AGCAATTTGA ATCGATGACA AGAGACTACG GGCTAGTGCC AGAGGAAGAA CATTACGCGT GTATGGTAGA TTTGCTAGGT CGAGCTGGTG AAATTGGAGA AGCTAAGTCG TTCATTGACA ACATGCCTGT GAAACCAATG GCCAGTGCTT GGGGAGCTCT TTTGAGTGCT TGTAGAATCC ATAAAGAAGT TGACTTAGCA GGAGAAGTCG CAGAGAAGCT CTTATCCATG GAACCCGATG AATCAAGTGT CTATGTTTTG CTTTCTAACA TATATGCTGA TGCTGGGATG TGGGAGATGG TGAATTGTGT GAGACGTAAA ATGGGTATCA AAGGATATAG AAAACCTATG GGACTATCTG CTACTGAAGT TGGCTAG 
Length1677
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2077892.. 2079568
Download Sequence
A.thaliana
AGI-codeAT1G06140.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias[MEF3][mitochondrial editing factor 3]
Gene coexpression
MR
MR Locus Description
43.9886 Ahg920552 Tetratricopeptide repeat (TPR)-like superfamily protein
44.1588 Ahg951424 Tetratricopeptide repeat (TPR)-like superfamily protein
45.913 Ahg476277 Pentatricopeptide repeat (PPR-like) superfamily protein
64.1561 Ahg896811 plasma membrane intrinsic protein 1;5
72.7186 Ahg313028 Thioredoxin superfamily protein
73.0479 Ahg938138 F-box associated ubiquitination effector family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression