Detail



ID : Ahg470709

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470709|fgenesh2_kg.1__663__AT1G06870.1
Sequence
GAGACTCTCT CTGCTATCGA CCAAACCTTC TCCTCTCCTC TGGGAGATCT CCAGCTTCTT CGCGCCTTCG CTTCCACTCG ATCTCGCCGG CGGCATAAGA TCTCCGTTTA TCTTTCCGGC AGATCGACTC TTCCAATTTC CGGTTAATTT CCTTAGGCCT TAGAAAAAAC CCTTACTTTC ATCAAAATCT GCATTTCATG GCGATTAGGG TTACCTTCAC CTACTCCAGC TATGTTGCTA GGAGCATTGC TTCTTCCGCC GGGACTCGTG TCGGCACCGG CGACGTTCGC TCATGCTTCG AATCATGGGT TCGTCCCAGA TTCTGCGGCC ACAATCAGAT ACCCGATATT GCTGATAAAT CTCCCGGATC CAACACATGC TCAAGCCCTC GTGCTCGACC AGCTTCATCG ATGTATAGCA CCATTGCGAG GGAACTCCTC GAAGAAGGAA GCAAGAGTCC ACTTGTGTTG GGTATGATCT CTCTCATGAA TTTGACAGGA GCTGCTCCAC AGCTCTCGGG TATGACCGGT CTCGGGATCT CTCCCTTTAA GACTTCTTCT GTTATCCCGT TCCTTAGGGG CTCCAAGTGG ATGCCTTGTA GTATTCCGGC GACGTTATCA ACGGATATTG CTGAGGTTGA TAGAGGAGGA AAGGTGTGTG ATGCTAAAGT GAAGTTGGAG TTGAGTGATA AAGTCTCTAA TGCTGGTAAC GGTTGGGTTA ATAAGCTGTT GAATATCTGC TCGGAAGATG CTAAGGCAGC TTTCACGGCG GTTACTGTTT CTCTCCTTTT CCGATCGGCG TTGGCTGAGC CAAAGTCTAT ACCTTCAACA TCTATGCTTC CTACTCTCGA TGTGGGTGAT CGTGTTATGG CTGAGAAGGT CTCATACCTT TTCAGAAAGC CAGAGGTTTC AGACATAGTT ATCTTCAAGG CTCCTCCTAT TTTGGTGGAA CATGGTTACA GTTGTACTGA TGTTTTTATA AAAAGGATAG TTGCTAGCGA AGGTGACTGG GTTGAAGTTT GTGATGGAAA GCTCTTAGTA AATGACACTG TTCAAGCAGA GGATTTTGTC TTAGAGCCAA TTGACTATGA AATGGAACCA ATGTTTGTCC CTGAAGGTTA TGTCTTCGTC CTAGGAGACA ACCGCAACAA AAGCTTTGAT TCTCATAACT GGGGTCCACT TCCAATAAAG AACATCATAG GGAGATCTGT ATTTCGCTAT TGGCCACCAA GCAAAGTGTC AGACATCATA CACCATGAAC AAGTTATCCA AAAGAGAGCT GTTGATGTTT CTTGACCAAA GCAGATGGTT CTTAGGATTA AGCAGAAAAT TTGATTAGAC GAGCTGTGCC ATGCCAACCA TTTTGGCGCT GAAGGCAACA GAGCAATTTT TTCTTCCTGT CTAGGCTTCT ATGGCGGACA TGGAATGCAA TGGGAAATCC ATAAAAAAAT TTTTGCTTTT GATTCTTTGA TGTGTTGAAA CCTAAATGCA ACCAGTGTAA TTGGCAGTCG CTGTCAAACA TAAAAGGGTG AACTATCTTT TTGAGTATTA TCTAATGTGA AAAATCCTGT AAACGTTCTG TTCTCAAGCT CT 
Length1592
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2335885.. 2338389
Download Sequence
A.thaliana
AGI-codeAT1G06870.1
DescriptionPeptidase S24/S26A/S26B/S26C family protein
TAIR curator summary
Alias[Plsp2A][plastidic type I signal peptidase 2A]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg471708 MATE efflux family protein
12.3693 Ahg479953 Fibronectin type III domain-containing protein
19.3649 Ahg489481 P-loop containing nucleoside triphosphate hydrolases superfamily protein
24.5561 Ahg492126 microtubule-associated protein 65-2
24.98 Ahg480424 Tetratricopeptide repeat (TPR)-like superfamily protein
30.4959 Ahg483663 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
31.4325 Ahg491367 alpha/beta-Hydrolases superfamily protein
32.0312 Ahg488180 Protein of unknown function (DUF155)
33.6452 Ahg473200 carbamoyl phosphate synthetase B
35.2987 Ahg492396 RAB geranylgeranyl transferase alpha subunit 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression