Detail


ID : Ahg470872

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470872|fgenesh2_kg.1__826__AT1G08140.1
Sequence
AATCGAACTA CAAACCCTAA ATCATTCCAT TAGATTTTCT TGATCCCTAA GCAATTCTCT TCGTTAACTT TTGACTTTCT CCTTAAAATG GATACAGAGC AGATGGACAT GAGTTATTGG GACATGACAT GGCGAGAATA CAATGAAGAC AACAACACGT CTCGCTTCTG CGAGACACAC CCTTACATAG TAAATTCGCA CGGGATATGG GAAGTTTTGA CTTACAAGAG AGGGATGAAA TTCTGGGAAT ATCCGCTACC GAATCTTGAG ATCTTAATCT TTTCTACTTT TTTAATATGG CGGCTTCTCG ACATCTCATT CAACAGAATT GGTCTTCGAG TACCTAGATT CACCTATATG ATGATCGCAG GGATAATCTT AGGTCAAACT TGCCATGTAA GCAACAAGTC TTGGCTCCAT AACATTTTTT TCCCTGATGA TAACCGACCA AAGGTCGCCG AGACGCTAGG GGCTTTCGGC TTCGTTTTAT ATTGGTTCCT CAAAGGTGTG ACCATGGATG CCGAATTGCC ATTTAAGACG GAGAAAAGGT CTAGTGTGAT CGGATTCATT ACAGTATTTA TACCCTTGAT TTGTGGCAGC CTCACATTTA GATGGAGAGA ACGAAGAGGG AACATAAGCT TGTTAAGGAC GGAGTACAGG TTGATCATAT TCTTGCAAAG CATATCCGCG TTCACTAGCA TTGACACACT CTTAAAAGAC CTCCAGATCA AACACTCAGA GTTTGGGCGG ATAGCCCTCT CTGGGGCTAT GGTGACTGAC ATGTTGGCTT TTGTTGTTAC ATTTTTCAAT GCAATCTACT GGGAAGGATA TTACGGCTTT ATGCAAACCA TAGGTTTCTG CCTCTTTGTC GTCGTTATGA TCTTCGTTGT GAGGCCAACT ATGTATTGGG TGATCAAGCA GACTCCAGAA GGGAGGCCGG TCAAGGATTT CTACCTCTAC TCGATTTTTG GGCTTGCTTT CGCCTCCTTC ACCTTTTTTG ACAAGGCTAT TCATCTTTTT GGACCTGCGG GATCATTTGT TTTTGGCTTG ACTGTTCCGA ATGGATATCC ATTAGGTGCT ACTTTGGTTC AAAAGTTTGA GAGCTTTAAT CTTGGAGCTA TCTTGCCACT CTTTGGATCA TTAACCATGA TGCAAGTAGA TCTCTTATGG TTGGTCAAAG AGAGTGGAAA TTTCATACGG ATGGAGGGTC AAATCTATGA GGTCATTTCC TTTATTCTTT TGGTGAATAC AGTAAAATTC GTTGTTACCA CCATAGCCGC GTATGCTTTT AAAATGCCCT TGAGAGACTC TTTTGCTTTA GCCCTTGTGC TTAGTAATAA GGGGATCTTC GAGCTCGCCT ACTACACGTT CGCGGTTGAA ATAAAGCTAA TAAGGCCAGA GGTTTTCACA ATCCTAGCAG CCTTCTCCCT CTTGAATTCT ATCTTTATAC CAATGCTCTT GGAGCTCGTG CATGACCCAA CCAAAAGATT CAAATGCTAC CGAAAAAGGA ATTTGGGCAT CTTGAAAGAC GGTGCGGCTC TCCAATGTCT TATGTGCGTC TACAAACCTG ATCACATAAC TTCCATGATC GACCTTTTGG AAACATTTAA CCCATCACAA GATTCTCCAA TGGCGTGTAA CACACTTCAC CTCGTCGAAC TTGTGGGTCA AGCCAATCCT ATGTTCATTT CCCACCAGTT GCAACAACCA GAGCCCGGAA GTACTTCTCT TTCCGACAAT GTCATAATCT CCTTCCGTCG CTTCCAAAGA CAATTCTTTG AATTTACATC GTTGGATATT TTTACTTCCG TCTCCTTGTC CCAACACATG CATGAGGACA TTTGTTGGCT AGCCCTATCC AGAAGTCTAT CTCTGATTGT GCTTCCTTTC CACCGAACCT GGTCCGTTGA TCGATCCACG ATTATCTCCA ACGATGATAA GCTGAGAATG ATCAACCTTA ACGTCCTGAG ACGTGCCCCA TGCTCTGTTG CAATCTTCAT CTATCGCAAG CCCATCGTCG AATCTCATAT GATTAATTCC CACAGCAAGA TATGTTTGAT TTTTAACGGT GGAAAAGACG ATACAGAAGC TTTGGCGATA ACAAATCGAA TGAGACTGAC AGACAAACGA ACAAGGCTAA CGATCATAAG ATTCATTCCA AAATCTTCTG AAATGGATAA CCATGAGTGG GAACAGCAGC AATCGATTAA CCTAAAGGAG TCCGTGACTA ACCTCATTGG GTCCAACATC AAAGAAAATG ATGAGAAGGT GACATATATC GATAAGGCGG TTTCTGATGG ATCTGAGACC TCAAGAATCT TACGAGCAAT GGCAAATGAT TATGACTTGT TTATCGTTGG AAGAGACAGC GGAATAGGTA CTGAGGCAAC TAGCGGAATT AGTGAATGGA CAGAGTTCGA TGAATTGGGA CCCATTGGAG ATTTATTAGC ATCACATGAA TATCCTTCGA GTGCATCAGT GTTGGTTGTA CAAAAACAAG TGTACATTCA TCATACAAAA AGCCAAAAAA GAATATCTTT CTAAGAAATA ATGTGAGATA TGTTCAATGC TCAGCTGTTC AATGTTGTAT TTCTCTACAT CAAAAAGATT AGTTTAGGCT GCGTGAAGTT GTGGAGTAAA ATAAATTCGA GTTTTTTCTG CATATGATGA TA
Length2672
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2879008.. 2882074
Download Sequence
A.thaliana
AGI-codeAT1G08140.1
Descriptioncation/H+ exchanger 6A
TAIR curator summarymember of Putative Na+/H+ antiporter family
Alias[ATCHX6A][CHX6A][cation/H+ exchanger 6A]
Gene coexpression
MR
MR Locus Description
16.2481 Ahg949333 C2H2-like zinc finger protein
24 Ahg351608 Protein of Unknown Function (DUF239)
37.7094 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
40.694 Ahg322709
53.2165 Ahg481664 transposable element gene
57.7062 Ahg916018 beta-galactosidase 14
65.6125 Ahg481945 LOB domain-containing protein 13
69.6276 Ahg316947 Pectin lyase-like superfamily protein
70.6753 Ahg351609 Protein of Unknown Function (DUF239)
72.3326 Ahg479506 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression