Detail



ID : Ahg471393

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471393|fgenesh2_kg.1__1347__AT1G12430.1
Sequence
CTTCACTCAA CACTCTCTCT CTCTCTCCTC TCTCAATTTT TGCAATTTTC CCGAGAAATT AAACTCCGTG AAAGAAAGAA AATTAAAGGA ATTTTCTCGG GAACTAATAA AATTGAGGAA ACACAAAAGA AGCTTCTTTG TTTTTGATAC TCTCCAAGAG AATTTGTTTG GTCTTTTTTG GATTTATGCG TTTGAAGAAG AAAAATGTCA ACGACTTCAG GAACCGGAGC TTTGAATTAC AGAAATGGGA CTCAAAGAAG CTCACTCAGA ACTCAGTCCT CTACTTCTAC TTCCTCCGGT GGTCAGAAAT CTTCTGTCAA ATCCAAGTCA GTGCTAAGAA AGAGCAGCCC CGCCGCACTT GGTGGTGGCG GCTCTTCTAA GTCTGGAAGC GGTGGCGACG CCGGTGTTCC TGGGAGAGTT CGAGTAGCTG TTAGATTAAG CCTACGCAAT GGTGAGGAAT TGATTGCTGA TGCTGATTTT GCTGATTGTA CATATACACT TGGGCAGCTT GGGGAAGAAG ATGTCGCTGA TCGTGGAATA ATGGTCCGTG CTATGGAGGA TATTTTAGCT GAAGTGTCGT TGGAGACGGA TTCTATATCT GTCTCCTATT TGCAGCTTTA TATGGAGACT GTACAAGATC TTCTTGATCC GTCTAATGAT AACATTGCTA TAGTTGAGGA CCCGAAAAAT GGAGATGTTT CTCTTCCAGG TGCCACTTTG GTCGAAATTA GGGATCAACA AAGCTTCCTG GAACTACTGC AACTCGGAGA AGCTCACCGG TTTGCTGCTA ATACCAAACT GAACACCGAG TCATCCCGTA GTCATGCTAT CTTAATGGTA AATGTCAGGC GCTCTTTGAA AACAAGAGAT GGCTTGTCAA GTGAAAGTAA TGGAAACTCC CATATGACTA AATCTCTTAA GCCTCCTGTT GTCCGGAAGG GAAAATTAGT CGTGGTGGAT CTTGCTGGAT CGGAACGTAT CAATAAATCA GGAAGTGAGG GACATACACT AGAGGAAGCC AAATCTATCA ATCTATCTCT GAGTGCACTG GGGAAATGCA TCAATGCACT TGCTGAAAAT AGTTCTCATG TTCCATTCCG TGATTCAAAG CTAACTAGAT TGCTTAGAGA TTCATTTGGA GGCACTGCAA GGACCTCCTT AGTTATTACA ATTGGTCCAT CACCACGACA TCGAGGGGAG ACAACAAGCA CTATAATGTT TGGGCAAAGG GCTATGAAAG TGGAAAATAT GGTGAAGTTA AAGGAAGAGT TTGATTACAA AAGCTTGTCT AGAAGACTTG AAGTACAACT AGACAATCTA ATCGAGGAAA ATGAAAGGCA GCAGAAAGCA TTCGTTGATG AAATCGAAAG AATAACCGTA GAAGCTCATA ACCAAATATC CGAGGCTGAA AAGAGATATG CCAATGCACT AGAGGAGGAA AAGCTAAGGT ATCAGAATGA TTACATTGAA TCAATAAAGA AGCTTGAGGA GAATTGGTCA AAGAATCAGA AAAAGCTGGC TGCTGAAAGA CTTGCACTTG GAGAAAAAAA TGGCCTAGAC ATCACATCAC ACGGCAATGT AACATCTCTG TTATCAATAG CCCCAGCCAT AGAAGAAGTC TCTGAACTGA AAAAGTTGCT TCAGAAAGAA GCTCAATCAA AGATGGCTGC TGAAGAGGAA GTGAATAGGC TTAAACATCA ACTCACCGAA TTTCAAAAAG TCGAAGCATC AGGGAATTCT GAGATCATGA GACTCCACAA GATGTTGGAA AATGAGACAC AGCAAAAAGA AGAACTAGAA GGGGAAATAG CAACACTGCA TTCTCAACTA CTGCAATTGA GTCTTACTGC TGATGAGACT CGACGAAACC TTGAGCAACA TGGTTCAGAG AAAACTTCTA GTGCTCGAGA TTCTTTAATG TCTCAGTTAA GACTTCCTCA GATCCAAGAT CCAGGAAATG CTGAGAAACC TCCTGTAGCT AGATTGTTTG AACAAGTGGG GTTGCAAAAG ATCTTGTCTC TGCTTGAAGC TGAAGATGCT GATGTGAGGA TTCATGCTGT CAAAGTGGTA GCAAATCTGG CTGCCGAAGA GGCAAATCAG CAACAAATTG TGGAAGCTGG TGGTCTCACC TCCTTGTTGA TGCTACTGAA GAATACAGAA GATGAGACTA TTCACAGAGT TGCTGCTGGT GCAATCGCCA ATCTTGCAAT GAATGAAACT AACCAGGAGC TGATCATGGA TCAAGGAGGC ATCGGTTTAT TGTCATCAAC AGCAGCCAAT GCTGAAGATC CTCAAACCCT TAGGATGGTT GCTGGAGCAA TTGCAAATCT TTGTGGAAAC GATAAATTGC AGACAAAACT AAGATCAGAA GGAGGTATTG CGGCTTTGTT GGGAATGGTG AGATGTGGAC ATCCTGATGT TCTTGCACAA GTTGCTCGTG GGATCGCAAA CTTTGCGAAA TGCGAGTCAA GAGCATCAAC ACAAGGAACT AAAAGAGGGA AATCACTATT AATAGAAGAC GGTGCACTCT CTTGGATTGT ACAAAATGCC AAAACCGAAA CCGCAGCCAT AAGGCGTCAC ATTGAATTAG CTCTTTGTCA CTTAGCACAA CATGAAGGGA ATGCGAAAGA GATGGTGAAG GAAGGAGCAA TATGGGAGCT GGTGAGGATC TCAAGAGACT GTTCAAGAGA AGACATAAGA TGTCTTGCTC ATAGAACTCT CACTTCAAGT CCTACTTTTC TCACTGAACT CAGACGTCTC CGTGTTGACA TCCGGTAAGC CGGTTTAACG CCTAACTTAA CCGAACCGAA TTGCGGAATA AAGAAGGATT AAAATATTTT AAAATTCAGT GAGATGAAGA TTTGTATGAT TTTGTTTTTA CTTATGTTTA GGTTTTCCGT GGCTTTGGCA TTTCTTTTTG TGGTTGGATG TGTATATTAT TTTGGTGCGT TTTGTTTGTG TAAATAGGAC GTAGTATTGA A 
Length2981
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4806266.. 4811197
Download Sequence
A.thaliana
AGI-codeAT1G12430.2
Descriptionarmadillo repeat kinesin 3
TAIR curator summaryEncodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations.
Alias[ARK3][AtKINUa][PAK][armadillo repeat kinesin 3][Arabidopsis thaliana KINESIN Ungrouped clade, gene A][phosphatidic acid kinase]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg495375 Tetratricopeptide repeat (TPR)-like superfamily protein
8.48528 Ahg478188 HEAT repeat ;WD domain, G-beta repeat protein protein
16.1245 Ahg475037 GPI transamidase subunit PIG-U
18.1108 Ahg942208 alfin-like 4
18.412 Ahg472083
23.9165 Ahg486655 Protein of unknown function (DUF3133)
24.7992 Ahg471789 XH/XS domain-containing protein
25.219 Ahg487889 Glycosyl hydrolase family protein
25.9808 Ahg939518 LMBR1-like membrane protein
26.5895 Ahg945352 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression