Detail



ID : Ahg471495

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471495|fgenesh2_kg.1__1449__AT1G13400.1
Sequence
GAGTTCCATG CTCAATGTTC TCATTGCTAA AGAGAGAAAT AAAGAGAAAG AGAAACTGAT TAAAAGAAAT TTCACAAAGC TCTCTTTATC TCCATCTTCA CTCCATCAAG TCTTTATCCT TACAAGTTTC TTCCTCTCCT GTCTTCTTGG TAACCATGAG AGCTGATGAT AATAACACTT TAGATCTTAA TAACTTACCT GATGATCCTT CTAGAGACAT TTTCCCTTTC TTTGAAGAAG GCTCCTCTTC CTCTTCCTCT TCTGGAGGGT TTAGAGAGAA GCAAACCAAA GACGGGAAAG AGTATGAATG TAGATTTTGT TCACTAAAGT TCTTCAAATC TCAAGCTCTA GGTGGCCACA TGAACCGCCA CCGTCAAGAA AGAGAGACGG AGTCACTAAA CAAAGCTCGT GAACTTGTTC TTCGCAACGA TAGCTTTCCT CCTCATCAAG GACTTCCATC GTTTAGTTAT CATCAAGGAG ATGTGCATAT AGGAGACCTA ACATCATTCA AACCAATGAT GTATCCACCA AGACTTTTCT CTAGCTCCTT CTCCGCCTCT TCCTCCGCCC TCCAGCTGCA GCCACCATTT CTTTATCCTC CTCCGTCACC ACCGTTTCCT CACCATCACA CCAACGATTA CTATCTAGGC AACAACGGTT CACATCACCA AATCCTAACC AATAGCGTTT GCGGTGCTCG TGCACTAGCT GACTCGAGTT ACACTTTCAT CGGAGCACCA GTGGCTAATG GTTCTAGAGT TGCTCCTCTA CCTTTACCTC CACATCATGG GCTAT 
Length795
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5366079.. 5367385
Download Sequence
A.thaliana
AGI-codeAT1G13400.1
DescriptionC2H2 and C2HC zinc fingers superfamily protein
TAIR curator summaryAlong with JAG, it is involved in stamen and carpel development. Expression is limited to the adaxial side of lateral organs. Activated by AGAMOUS in a cal-1, ap1-1 background.
Alias[JGL][NUB][JAGGED-LIKE][NUBBIN]
Gene coexpression
MR
MR Locus Description
1 Ahg893437
5.19615 Ahg314065
10.7703 Ahg952121 Cysteine/Histidine-rich C1 domain family protein
16.3707 Ahg479336 VQ motif-containing protein
20.664 Ahg921128
25.2389 Ahg924803
25.6905 Ahg951000 myb domain protein 99
25.8844 Ahg887586
26.8328 Ahg475881 terminal EAR1-like 2
27.5681 Ahg948369 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression