Detail



ID : Ahg471538

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471538|fgenesh2_kg.1__1492__AT1G13790.1
Sequence
ATGTATTCCA GAAGAGAGCT GGAAGATTTG GAGTACCGAT ACTACAGTGA AATGAAAGAT GGTACTAGGA AGGTCAAATT CTCAGAGTCT CTGTTCAGGT GTCCCTTCTG CTACAGAGAT CGAAAGCGTG ATTACCAGTT TGATGACTTG TATCGTCATG CTTCTGGTAT TGGCGGTAGC TCCCGCACTA AGGATGGGAG AGAAAGAGCT AGACATCTTG CACTGGAGAG ATATATGAGG AAGTATCTCC GCCCTCGAGA AAGACCAGAT CCTACTCCAA CTTCAGATGT CTCTTCTCTT CCTAAAGAGG AGTTTACCAG AAAGTGGAAA TCCACTTTGT CAACTACTGA AGAAGGAGAA TTCATAAGCA TTGAAAAATC TACTTCACTT CATATTGTCA AAGCTGAACC AAAGTCTGTC TCAGGAGATG ATCCTGGACG AAGTGGTGAG AAAAGACCAA AGTTTTCTGA TAAACCCAAC CCCTCTTTTA GCAACGAAGA CAAATCATAC CCTGTCAAAA GACCTTGCCT AGTTTCTGGT GCTAAAGAGA GAGAAGAACC TGTCCAACAG ATTGGTCTCA GCCATGGTGC TAGATTTGCT CCTCAGAAGC TAGTTTCTTT GGGTGCTGGT AATGGGGATC AGATGTTTGT GCATCCCTGG AAAGGTATCC TGGCGAACAT GAAAAGAACT TTAGATGAGG AAACAGGGAA GTATGCTGGT GAGAGTGGAA GCAAGATAAG AGAAGAACTG GTCAACAAAG GGTTTAATCC CCACAAAGTC ACGCCATTGT GGAATGGAAA ATTTGGTTTT ACTGGTTTTG CTATTGTTGA CTTTGGTAAA GAGTGGGAAG GATTCAGAAA CGCGACCATG TTTGATAAAC ACTTTGAAGT GAATCAGTGT GGGAAAAGAG ACCATGATTT CACACGTGAT CCAGGTGATA AACTTTATGG TTGGGTAGCA AAACAAGATG ACTACTATTC AAGAACTGCT ATTGGTGACT ACCTCAGGAA ACAAGGGGAC TTGAAGAGTG TTTCTGGTAA AGAGGCAGAA GATCAAAGAA AGACATTCAC GCTTGTCTCA AACTTGGAAA ACACACTGGA AGACAAAAAC ACTAATCTTC AACAAATGGA GAGCATCTAC AAAAAAACCA GTTCAGTGCT TGAGAAAAGA ATGAGAGAGA AGGATGAAAT GATCGACACA CATAATGAAA AAATGAGTAG TATGCAGCAA ACTGCGCGTG ATTATTTGGC AAGTATTTAT GAAGAACATG AAAAGGCCTC TCAGCATCTG GAAGCTCAAA GGAAAGAATA TGAAGACCGG GAGAAATATC TGGATAAGTG TCAAGCTAAG AATAAGACTG AGCGGAGAAA GCTTCAATGG CAAAAGCAGA AGAACTTAAT GGCAACTCAA GAACAAAACA AAGCTGATGA AGACATGATG AGATTGGCAG AACAGCAACA GAGGGAGAAA GATGAATTAC GTAAGCAAGT CCGTGAGCTT GAGCAGAAAC TCGATGCTGA GCAGGCATTG GAGCTAGAGA TAGAGCGTAT GAGGGGTGAC TTGCAGGTCA TGGGACACAT GCAAGAAGGT GAAGGTGAAG ATTCAAAAAT CAAGGAGATG ATAGAAAAGA CAAAGGAAGA ACTGAAGGAG AAAGAAGAGG ATTGGGAATT CCAAGAGTCG CTCTATCAAA CTCTTGTTGT AAAACATGGC TACACTAACG ATGAGCTACA GGATGCGCGC AAGGCTTTGA TTCATTCAAT GCGGGAGTTG ACCTCACGAG CTTACATTGG TGTGAAGAGA ATGGGAGCAT TGGATGAGAA ACCGTTCCAA AAATTAGCTA AAGAGAAATA TCCAGCCGAA GAAGCTGATG AAAAAGCCGC AGAGCTCTGT TCCTTGTGGG AAGAGCACTT GGGAGACTCG GCTTGGCATC CGATTAAGGT TGTCGTAAAA GATGGAACCC CAAAGGAAGA ACTGAATGAA GAAGATGAGA AGCTACAAGA GCTGAGGAAA GAGTTGGGTG AGGAAGTGTA TGCAGCTGTG ACACAAGCGC TTAAAGAAAG GAACGAGTAT AATGGCAGTG GAAGGTACAT AGTGCCTGAG CTTTGGAATT TCAGAGAAAA CAGAAAAGCG ACTATCAAGG AAGGAGTTGT TTATCTGCTC AACTCGTGGA AACAGAAGAA ACCAAAGCCG AAGCGTAGAT AAATAAATTT TATTCTAGAA ACCTCTATTG TTGATAATTA TTAAGAGTAG ATGAGATTTT ATGATTATCC CCACTAAGAA TAGTTAT 
Length2287
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5533516.. 5536410
Download Sequence
A.thaliana
AGI-codeAT1G13790.1
DescriptionXH/XS domain-containing protein
TAIR curator summary
Alias[FDM4][factor of DNA methylation 4]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg947352 Exostosin family protein
5.09902 Ahg474258 ABC-2 type transporter family protein
5.47723 Ahg478421 methyl esterase 17
11.1803 Ahg488776 Adenosylmethionine decarboxylase family protein
21.6333 Ahg493738 ARM repeat superfamily protein
24.4949 Ahg923871
25.3377 Ahg356016 ATP-dependent RNA helicase, mitochondrial, putative
27.6586 Ahg482498 poltergeist like 1
28.775 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
31.9687 Ahg476935 putative protein kinase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression