Detail



ID : Ahg471733

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471733|fgenesh2_kg.1__1687__AT1G15360.1
Sequence
TCCATCTTAC ATATATTACT CATCATCAAG TTCCTACTTT CTCTCTGACA AAAAACACAG AGTAAGTAAG AATGGTACAG ACGAAGAAGT TCAGAGGTGT CAGGCAACGC CATTGGGGTT CTTGGGTCGC TGAGATTCGT CATCCTCTCT TGAAGCGGAG GATTTGGCTA GGGACGTTCG AGACCGCTGA GGAGGCAGCA AGAGCTTACG ATGAGGCCGC CGTTTTAATG AGCGGCCGCA ACGCCAAGAC CAACTTTCCC TTCAACAACA ACACCGGAGA CACATCCGAG GGCAAAACCG ATATTTCATC TTCGTCCACA ATATCATCCT CATCATCTTC ATCGCTCTCT TCCATCCTCA GCGCCAAACT GAGGAAATGC TGCAAGTCTC CTTCTCCATC CCTCACCTGC CTCCGTCTCG ACACGGCCAG CTCCCACATC GGCGTCTGGC AGAAACGCGC CGGTTCCAAG TCTGACTCCA GCTGGGTCAT GACGGTGGAG CTCGGTGCCG CCAGCTCCTC CCAAGAGACT ACTAGTAAAG ATTCACAAGA CGATCTTGCT CCGACCACTG AACTTGAGGT TGGTGGCAGA GGAGAAGAAG GGATGGATGA GGAAGAGAAG GTTGCTTTGC AAATGATAGA GGAGCTTCTC AATACAAACT AAACCTTATT TGCTTATATA TATGTACCTA TTTTTATTGC TGATTTACAG CCATAATAAT CAATTATACT GTCTATTTTA TGCATCGTTT TTATATTTAA AAGGTGTTAG CTATATATTG TTTCTCTTAT TTCCACATTT GTATCTAATA AAGTATTGAT GTTTGTAACT 
Length830
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6193807.. 6194938
Download Sequence
A.thaliana
AGI-codeAT1G15360.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryEncodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.
Alias[SHN1][WIN1][SHINE 1][WAX INDUCER 1]
Gene coexpression
MR
MR Locus Description
19.3649 Ahg926896 Protein of unknown function (DUF620)
20.1246 Ahg887734
23.2379 Ahg496052 copper transporter 3
26.2107 Ahg932567 Peroxidase superfamily protein
26.4008 Ahg930832
31.4006 Ahg895302
35.4683 Ahg479711 Domain of unknown function (DUF26)
36.8782 Ahg899940
37.5766 Ahg351860
42 Ahg333513
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression