Detail



ID : Ahg472103

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472103|fgenesh2_kg.1__2057__AT1G18790.1
Sequence
ATGATGAAAT CGTTTTGCAA GTTGGAGTAT CATCAAGTAT TTGGCAAAGA AGATATATCA TTCTCATTTC TAAACCACTC ATCACTTTAC TCTAATCAAA GCGAGTTAGC GAATCCTTTC TTCGAATTGG AAGACGAGAT TCTTCCTTCT GCAACCTCTA GTAATTACTT TACTTCTGCC TCAAGCTTTC TTGCTTTACC TGATCTTGAA CCCATCTCCA TCGTATCTCA TGAAGCAGAT ATACTTAGTT TGTATGGTTC TGCTTCATGG ACCGAAGAAG AGTCGATGCT CGATTCTGAT TTTGCGAAAA AGAGTGAAAC CACAACTACC AAGAAGAAGA GATGCAGAGA AGAATGTGTT TCTAGTTGTT CTGTTTCAAA GACATTGTCG AAGGAAACCA TCTCATTGTA CTTTTACATG CCGATAACTC AAGCGGCTAG AGAGCTTAAC ATTGGTTTAA CTCTTTTGAA GAAGAGATGC CGCGAATTGG GTATCAAACG TTGGCCTCAT CGTAAGCTCA TGAGCCTACA AAAACTCATC AGCAATGTCA AGGAGATAGA GAAGATGGAA GGGGAAGAAA ATGAAGATAG GCTAAGAAAT GCTTTGGAAA AGCTCGAGAA GGAGAAAAAA ACGATTGAGA AGTTACCAGA TTTGAAGTTT GAGGATAAGA CAAAGAGATT GAGACAAGCT TGTTTCAAGG CTAACCATAA GAGGAAGAGA AGAAGTGGCA TGTCCACGCC CATCACATCA TCATCTTCTT CTGCTTCTTC CTCTTCTT 
Length778
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7565738.. 7566919
Download Sequence
A.thaliana
AGI-codeAT1G18790.1
DescriptionRWP-RK domain-containing protein
TAIR curator summary
Alias[AtRKD1][RKD1][URP5][RWP-RK domain containing 1][UAS-TAGGED ROOT PATTERNING5]
Gene coexpression
MR
MR Locus Description
12.5698 Ahg316133 Protein of unknown function (DUF579)
13.4907 Ahg925969 Zinc-finger domain of monoamine-oxidase A repressor R1 protein
14.8997 Ahg492672 Protein of unknown function, DUF584
16.7033 Ahg315326 Nodulin MtN21 /EamA-like transporter family protein
19.2094 Ahg350217 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
19.4936 Ahg932842 Protein of unknown function (DUF295)
24.3926 Ahg351609 Protein of Unknown Function (DUF239)
26.5707 Ahg493850 Receptor-like protein kinase-related family protein
32.7414 Ahg929121
32.8634 Ahg894454 Xanthine/uracil permease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression