Detail



ID : Ahg472264

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472264|fgenesh2_kg.1__2218__AT1G20370.1
Sequence
TTAATCGTAG CAAAGAACTA CACTCAGTGG TGAAAATGGA GAATCAAGAG CCTGATATCG AGAAATTGCC TCGAGACGAT GTTCCTGATA GAGAACCAGA CCATAAGAAG CTCAAGATTT CGACCACCGG CCAGGAAATT GATTCCTCGG CTGTTACCGC CGGCGGAAGC AACGTCGCTG AGCGTAGAGC GCCGAAATAC AGACGCCGGA AAGTCGCAAT CATGTTTGCG TTTTGCGGAG TAGGCTATCA GGGAATGCAA AAGAATCCCG GCGCCAAAAC CATTGAAGGC GAGCTCGAAG AAGCTTTGTT CCATGCCGGA GCAGTACCTG AGGCTGATCG GAACAAACCA AGAAATTACG AATGGGCACG ATCCGCCCGT ACCGATAAAG GAGTGAGTGC GGTGGGACAA GTGGTTTCTG GTCGTTTTTA TGTTGATCCG CCTGGATTTG TGGAGCGGCT CAATTCGAAG CTCCCTGATC AGATTCGTGT GTTTGGGTAC AAGCGTGTTG CACCGTCGTT TAGCTCCAAG AAATTATGTG ATCGGAGGAG GTATGTGTAT CTAATTCCGG TTTTTGCTTT GGATCCATGC GTACATAGTG AAGCTGAGAT GGTTAGAACG GATTTAGGTT ACGAATATGT CAAATGTGTT GAGTGCTTTG AGAAAGGCTA TAAGATTCCA GTTGGTATTC AGTCAGACAT TTCGTTGAGC AACTTTGATG CATTAGGAAC TGATGTCAAG TGTGAAACTT TGAGCTCTAG TGTACCTAAT GTAGAAAGTA ACTTAAACTC AGAAGTTCTA GATGTGGCTG ATGTATCTGC TACGACAGAG AAAAACCCTG ATTCAAGCTC TAAAGCAGAG GATATGGAAG AATCGAATTT GGATTCTTCG AAAGAATCGA ATATTTTGGC TAAGGAAGAG ATGAACAATG GGGAAGGAGG AGACATGACA GAGAGCAAGT TCTGTTATGG AGAGAAGGAA AAAGAGAGGT TTAATAGAAT TCTAAGCTAT TATGTTGGTT CACATAACTT TCACAACTTC ACCACCAGAA CGAAAGCAGC AGACCCAGCT GCGAATCGCT ACATTCTCTC TTTCAATGCA AACACAGTGA TTAATCTCGA TGGAAAAGAT TTTGTCAAGT GTGAAGTTGT TGGACAGAGC TTCATGCTTC ATCAAATCCG GAAAATGATT GGACTTGCTG TTGCAGTCAT GAGGAACTAT GCACCTGAAT CACTGATCGA AACTGCTTTC AAGAAGGATG TGAGAATCAA TGTACCGATG GCGCCAGAAG TTGGATTATA CCTTGATGAA TGCTTCTTCA CGTCTTACAA CAAAAGGTTT AAAGGCAGTC ATGAGGAGGT GTCAATGGAA GAGTTCAAGG AAGTAGCTGA AGAGTTCAAA TGGAAGTATG TTTATTCACA TATTGGCTCT GCTGAAGAAA AAGATGGAGC TGTGGCGATT TGGTTGCATT CTCTGAACCA GAGAAACTAT CCTGATCTAC GAAGCAATGA ATACAAACCG AATGAAGTCA TTGTCTATAA GAAGATTGGT GAAGCCTCTG AAGAAAATAT CCATGAAGAG AAAATTACAG TGAAAGAGAA CACTAATGGC AATGCAGAGC TATTCGTTGT CGATAAGGTG AATGATGAAA CTTCTGAAGG AACGATTATG GAAGAGAGGA CCACACTAGA CGAGAAGGCA ACTGGGTGAA GCCGCTTTTA TCTACTGCGG ATCACTGGAT TAAGGTGGAA GCATCAAGCT TCACCCGCAG GTCCAAACCG GACTAGTGAG CCAGATGAGT AACATTTGGA CATTTGTTTC AGTGTGTCCT TTGAGTTTTG TCTCTCATGA CAAAATTTTG GAAACTTAAG TCATGTGTTA GCATTGTGAC ATTTTGATCT TATAATAATT TTACCGAATA AGTATTGGCT ATGC 
Length1934
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8282723.. 8285025
Download Sequence
A.thaliana
AGI-codeAT1G20370.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.3288 Ahg936247
40.1123 Ahg927888 cysteine synthase 26
43.9318 Ahg482274 MOS4-associated complex 3B
59.3717 Ahg933914 SU(VAR)3-9 homolog 2
64.4826 Ahg493135 O-fucosyltransferase family protein
72.5534 Ahg486812 Ubiquitin carboxyl-terminal hydrolase family protein
72.5948 Ahg489493 5'-3' exonuclease family protein
73.3008 Ahg942428 Ribosomal protein S24e family protein
86.5794 Ahg473757 ribosomal protein 1
86.9885 Ahg888226 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression