Detail



ID : Ahg472617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472617|fgenesh2_kg.1__2571__AT1G23540.1
Sequence
ATGTCAGACT CAGGCGATTC GCCGAGTTCT TCACCACCAG CTGATTCCGC TCCTCCGCCA GATACTTCAT CCGGAAATTC TGCTCCTCCA CCTGTTGAAT CTTCTCCTCC TAGTCCACCG GCTGATTCAT CACCACCGCA GCCGTCGGAA CCGTCGCCTC CTCCTCCCGA TTCACAGCTT CCTCCTTTAC CTTCGATTCT TCCTCCGATA ACAGATTCTC CACCTCCGCC TTCTGATTCT TCTCCACCGG CTGATTCAAC CCCTTCTCCG CCGCCACCGA CGTCAAACGA ATCGCCTTCT CCTCCGGCGG ATTCTGAAAC ACCACCGGCT CCACCAAATG AACCCAATGA CAACAACCCT CCTCCGTCTC AACATGTTCA ATCGCCTCCT CCATCTTCGC CGAGTGTAGG ACCCACAAAC CCGGAATCAC CACCGTCACA ATCTCCTCCG GCTCCACCAT CATCAGATCC TACCAATTCA CCTCCAGCTC CACCATCAGA CCCTACCAAA CCTCCCCCAA TTCAACCATC AGGACCAACC ACTTCTCCTC CGGCTAATCC CAAAGCGCCG CCGAGCCCAT TCTACACAGC ACCACCCAAA ACTGCTTCCG GTGGACCTAT CGTCTCTCCA TCTCTCACAG TTCCCAGCAA AGGAACGCCT TCCTCAAACC AAGGCAATGG AGATGGTGGC GGCTATCAAG GGAAGACTAT GGTTGGTATG GCTGTAGCGG GTTTCGCGAT CATGGCGCTT ATAGCGGTTG TGTTCTTAGT GAGAAGAAAG AAGAAGAGAA ACATTGATAG TTATAATCAC TCACAGTACT TGCCACATCC CAATTTCTCT GTTAAATCAG ATGGATTCTT ATACGGTCAA GATCCAGGTA AAGGATACTC CTCTGGTCCT GGTGGTTCAA TGTACAATTC ACAGCAACAA CATTCCTCTA TGGGAAACAG CTTCGGCACA CAGGGTGGTT ATCCTCATCA TCAAATGCAA TCCAGTGGCA CACCTGACTC TGCTATACTC GGAAGTGGCC AGACACATTT CAGTTACGAA GAGCTTGCAG AGATAACACA AGGCTTTGCT CGCCAAAACA TTCTTGGAGA AGGCGGATTT GGATGTGTCT ATAAAGGTAC ATTGCAGGAT GGTAAAGTTG TTGCGGTTAA GCAGCTTAAA GCTGGAAGTG GACAAGGTGA CCGTGAATTC AAGGCAGAGG TTGAGATCAT CAGCCGCGTT CACCATCGCC ATTTGGTCTC TCTGGTCGGT TACTGCATTT CGGACCAACA TAGATTGCTT ATCTATGAGT ATGTTTCTAA TCAAACCTTG GAGCATCATT TGCACGGAAA GGGTTTGCCA GTTTTAGAGT GGTCTAAGAG AGTCCGGATC GCTATAGGAT CAGCCAAAGG GTTGGCGTAT CTTCACGAAG ACTGTCATCC GAAAATCATA CACAGGGACA TAAAGTCAGC AAATATTCTT CTAGATGATG AATATGAAGC TCAGGCAATA ATGAAATCCC CATTTCTTTA TACTCATCTT ATGACTCTAA AAGTTGCTGA TTTTGGACTT GCTAGACTCA ATGATACAAC ACAAACTCAC GTTTCAACTC GGGTTATGGG AACCTTCGGG TACCTAGCGC CGGAATATGC ATCAAGTGGA AAATTGACTG ATAGATCCGA TGTTTTCTCG TTCGGAGTTG TTCTCTTAGA GCTTGTAACT GGACGGAAAC CAGTTGATCA GAGTCAGCCT CTAGGAGAAG AGAGTTTGGT TGAATGGGCG CGCCCGCTGC TTCTCAAAGC CATTGAGACT GGAGATTTAA GCGAACTGAT TGATAGACGG CTTGAACAGC ATTATGTGGA GCAGGAAGTC TTCAGAATGA TCGAGACAGC CGCTGCATGT GTTAGACATT CTGGTCCAAA ACGTCCACGC ATGGTTCAGG TTGTGAGAGC ATTGGACTGC GACGGAGACT CGGGAGATAT TAGCAACGGG ATCAAAGTTG GGCAAAGCAC AACTTATGAC TCAGGGCAAT ACAATGAAGA CATCATGAAA TTCAGAAAAA TGGCGTTTGG TGTTGATAAC AGCGTAGAGT CAGGATTGTA CAGTGGAAAC TACTCTGCCA AAAGCTCTTC AGATTTCTCA GGGAATGAAT CCGAGACTCG GCCTTTCAAT AACCGACGGT TCTGATCATA CAATAGGTGA AAGTAACAGA TACCTCTGCC TCCTTGGGCG TTGTAAAGCC ATTCTTTTCG TATATTGCAT TTCTTGGTAG GTGCCTTTAG TTTTTGTCCT CT 
Length2282
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9925635.. 9928616
Download Sequence
A.thaliana
AGI-codeAT1G23540.1
DescriptionProtein kinase superfamily protein
TAIR curator summaryEncodes a member of the PERK family of putative receptor kinases. Overexpression leads to morphological defects and reduced fertility and increased expression of MAX genes.
Alias[AtPERK12][IGI1][PERK12][proline-rich extensin like receptor kinase][INFLORESCENCE GROWTH INHIBITOR 1][proline-rich extensin-like receptor kinase 12]
Gene coexpression
MR
MR Locus Description
28.6531 Ahg341194 Homeodomain-like superfamily protein
44.5197 Ahg936672 Protein of unknown function (DUF1216)
49.3255 Ahg341831
62.6418 Ahg945462
65.192 Ahg945147 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
67.0149 Ahg915158
70.2709 Ahg314403 C2H2 type zinc finger transcription factor family
86.2206 Ahg895302
89.5321 Ahg938139
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression