| Annotation |
|---|
| Description | jgi|Araly1|945147|scaffold_701376.1 |
| Sequence |
CTAGGGGTGA AGATGATATC ATGGAGATCT TATGGAAGAG CCGCCAAGTT GTGCGAACCA GCCAGACACA GAGACCCTCT CCACCTCCCA TTCTCCGCGG CAGCGGAAGC GGAAGTGGAA GCAGGGGCGG AGAAGAAAAT GCTCTGCTTC CTCTTCCTCT TCCCCATCCT CCGCCTCCAC TTCCCCAGCC TCCGCCTCAT CAGGAAGAAG AAATGGTGTC TTGGCTTCAC CATCATCTCC GCCAGGATTA TGTCTGCTCC AAAATTATCT ACTCCATTCC CGCTACTAAC CCGCAAAGTT CCGTCTCCCT GGAACCACCA CCACTGCCCC CCAGTGCTCC CTATATTCTG CCGGCGTCGA GACTCACATG TCAGCTTCGT GGTGTACAGG GAACTGAAGA AGCTCGTGGT TCAACGTCCA GGAAGAGGTC ACGAGCTGCA GAAATGCATA ACCTTGCCGA AAGGAGAAGG AGAGAAAAGA TCAACGAGAA GATGAAGACT CTGCAAGAAC TCATTCCTCG CTGCAACAAG TCTACTAAAG TTTCAACGCT GGATGCTGCT ATCGAGTACG TCAAATGGCT ACAGAGCCAA ATACAAATGA TCTTGATGGG CCAAGGTATG ATGCCTTCGA TGATGAATGA GGAAAATATG CAAGAGTTCA TGCCCCACAT GGCCATGAAG ATGATGGGTA TGAACAGACC TCCATTCATA CCTTCTCCCG GCACACCTTT TCCTAGCCCG GCTCAAATAG CGGGTGTAGG TCCATCTCAA GCATATCCAG CAGCGCGCTA CCCTTTTCCC AACATTCAGA CCTTTGACCC ATCCAGAGTC CGTTTACCAA GTCCGGTGGT TAACCAGACT CACTTTCCGG CTTACATGAA TCCCTATAGC CATTTTGTTG GTCACCACCA GATGCTGCAA CCTCCTCCTC CATTGCAGAG TCAAACAACA CCACAGCTGA GTTCCGGCCA GGCAAGTAGT AGCAAGGAAC CTGAGGATAA AGACAGCCAA CCAAAAGAGT TTGGGTTTTG GTTTGAAATT AGGGGTGAAG ATGATATTGT GGAGCTCTTA TGGAAGAGCG GCCGAGTCGT TCAAAGCAGC CAGACACAGA GACCTTCTTC CGATCCTCCT CCCATTCTCC GCGGCAGCGG AAGCGGCGGC GGAGAAGAAG AAGAAAATGC CCCGCTTCCT CCACCTCCAC CTCTGCCTCC CCTGCATCAT CAAAATCTCT TCATTCAAGA AGACGAAATG TATTCTTGGC TTCACCAATC TTACCGCCAA GATTATTTAT GCTCCGAACT TCGCTACTCC GGCGTCGCCT CCAATCCGGC TACTCACCCG CAAAGTTCCA TCTCTCCGGC ACCATGTCCT TTTGCTCCAT ACGATCAGCG GGGTCAGACT ATCGCCACGA GAAGGGTGGA GAACTTTATG AACTTCTCGT GGCTAAGAGG GAACATATTT ACTGGCGGTA GAGTTGAAGC TGGAGTGGTG AGAGAATCGA TCCAGTTGGG TTCGAGCACG ACCCCTTCGT CTTCGGCCAC TGAATCATGT GTAATACCAG CGACAGAAGG CACCGAGAGT CGAGTGTCAC AAACTTTGGC AGTTCCTGGT CTTGGTCAGA AGGGAAAGGC GGTGGTGATT GAAACGGCCG GAACTCCATC TTCAGGAGTG TGCAAGGCCG AAACAGAGCC GGTTCAGATA CAACCAGCAA CCATTGTCGA AATCCAGGGA ACTGAAGAAG CTCGTGGTTC AACGTCCAGG AAGAGGTCAA GAACTGCAGA AATGCATAAT TTCGCCGAAA GGAGACGGAG AGAAAAGATC AACGAGAATA TAAAGACTCT GCAAGAACTC ATTCCTCGCT GCAACAAGTC CACTAAAGTT TCAACGCTGG ATGATGCTAT CGAGTACGTC AAATGGCTAC AGAGCCAAAT ACAAATGATG TCGACAGGAC AGGGTATGAT GCCGCCAATG ATGTATGCAG GGAATACGCA ACAGTTCATG CCCCACATGG CCATGGATAT GAACCGGCCT CCGCCATTCA TACCTTTCCC CGACACACCA TTTCCTAGGC CGGCTCAAAT GGCGGATGTA GATCCATCAT ATCCAGCACC GCGCTACCCT TTATCCGGCA TTCAAACCTT TGACCCATCC AGAGTCCATT TACGAAGTCC GCAGCCTAAC CCGGTGTCGA ACCAGCCACA GTTTCCGGCT TACATGAATC CCTATAGCCA GTTTGCTGAT CTCCACCAGT TGCAACAACC TCCTCCTCCT CCATTTCAGA TTAGGGGTGA AGATGATATA GTGGAACTCT TATGGAAGAG CGGCCAACTC GTTCGAACCA CCCAAACACA GAGACCTTCC TCCGATAAAC CCTCTTCTCC TCCACCCGTT CTCCGCGGTA GTGGAAGCGG CGGGGGAGAT GAAAATGCTC CACTTCCGCT TCCGCTTCCA CAGCCTCCAC CTCCCCTGCA TCATCAGAAT CTCTTCATTC AGGAAGATGA ATTGTCTTCC TGGCTTCACA ATTTTTACCC CGGCGTCACG TCCACCCCGG CTACTCATCC CCAAAGTTCT GTCTCCCTGC CACCACCATC CAATGCTCCG TATATTTCCA GTTTTTTTCT TCATTCTCTT GCTTTCTGCA ATTTGATGAG TCTGATATTA GAGTTTGGAT TTTGGATTGA AATTAGGGGT GAAGATGATG TGGTGGAGCT CTTATGGAAA AGCGGCCAAG TCGTTCAAAG CAGCCAGACA CAGAGATCCA TTCCTCCTCC CATTTTCCGC GGCAGCGGAA GCAGGAGCGG TGAAGAAACT GCTCTCCCTC CGCCTCCCCT GCATCCTTCT CAGCAGATTC TCTTTATCCA GGAAGACGAA ATAGCGTCTT GGCTTTACCA TCCTCTCCTC CAAGATTATC TTTCCTCCGG CGTCACTTCT ACTCCGGCTA CTCACCGACA AGGTTCCGTC TCTCTGGCAC CACCACCACC ACTCAGTGCT CCGTACGGTC AGATTACCGC TGCCAGAAGG ACAGATAATT TTATGAACTT CTTGAGGCTT AAAGGGAACA TACTTACCGG CGGTAGAGTT GAAGCTGGGC CGGTGGTGAT AGAATCGACG CAGGTAGGCT CAAGCGCGAC CCCGTCGTCT TCAGCCACTG AATCCTGTGT AATACCAGTG ACTCACGGCA CCGAGAGTCG AGCAACGGTC ATTGGCGGAG TATCCCGTAC TTTTGCAGTT CCCGGTTTTG GTAGGAGGGG AAAGGCGGTG GCGATCGAGA CGGCTGGAAC ATCATCTTCG GGGGTATGCA AGGCCGAAAC AGAGCCGGTT CGAATACAAC CGGAGACTGA GACGGAAATT TCCGAAGACA GGGAGCGAAA GGAGAGAGAA GAAACCATTG TCGAAATCCA GGGAACTGAA GAAGCTCGTG GTTCAACGTC TAGGAAGAGG TCACGAGCTG CAGAAATGCA TAACCTCGCC GAAAGGAGAA GGAGAGAAAA GATCAACGAG AAGATGAAGA CTCTGCAAGA ACTCATTCCT CGCTGCAACA AGTCTACTAA AGTTTCAACG CTGGAAGATG TTATCGAGTA CATGAAATCA CTACAGATGC AAATACAGAT GATGTCGATG GGTCATGGTA TGATGCCACC GATGATGAAT GCGGAGAATA TGCAACAGTT CATGCCCCAC ATGGCCATGG GGATGAACCG GCCTCCTCCA TTCATACATT TCCCTGGCAC AGCTTTTCCT AGGCCGGGTC ATATGGCAGG TGTAGGTCCA TCATATCCAG CATCGCGCTA CCCTTTTCCA AACACACAAG CTTCTGACCC ACCCAGAGTC CAATTACCAA GTCTGGAGAC TGATAACCCG GTGCCAAACC AGCCTCTATT TCCGGCTTAC ATGAATCCTT ATAGCCAGTT TGTTGGTCTC CACCAGATGC AACAACCTCC TCCTCCATTG CAGGTTTTGG GCTTTCGTTT GAAAAATAGG GGTGAAGATG ATATAGTGGA GCTCTTTTGG AAGATTGGCC AAGTCGTTCG AAGCAGCCAG ACAGAGATAC CCTCTTCTGA TCCTACTCCC ATTCTCCGCG GCAGGGGAAG TAGAGGCGGA GAAGAAAATG TTCCGCTTCC GCCTCCTCTG CCTCCACCGC ATCATCAAAA TCTCTTCATC CAGGAAGATG ATATGTCTTC TTGGATTCAT CATCATCCTC TCCTTCAAGA TTATTTATGC TCTCAACTTT ATGCTTCCAC TCCGGCTCCT CACCCGCAGA GTTCCGTCCC TCTGGCACCA CCACAATCCA GTGCTCCGTA CGGTCAGATT ATTATCGCTC CAAGAAGGGA GGAGAATGTT ATGAACTTCT TGAGGCTAAG AGGTAACATA TTAACTGGCG GTAGCGTTGA AGCTGGACCG TGGATTCCGG TGGGTTCGAG CGCGACCACG TCCTTATCGG CCACTGAATC CAATCTAACA CCAGCGACCG AGAGTCTACC AACTGTCACT GGCGGAGTGT TCCACACTTT TTCAGTTCCC AGTCGTGGTG GGAAGGAAAA GGCGGTGGCC ATTCAGACGG TTTGCGAGAT CGCCGGAACA TCATCTTCAG GCGTTGAAAC AGAGCCGGTC CGGATACAAC CAGCGACGGA GACTGATATT GCCGATGGCA GGGAGCGAAA GGAGAGAGAA GAAACCATCG CCGGAATCCA GGGAACTGAA GAAGCTCGTG GTTCAACATC TAGGAAGAGA TCACGAGCTG CAGAAATGCA TAACCTCGCC GAAAGGAGAA GGAGAGAAAA GATCAACGAG AAGATGAAGA CTCTGCAAGA ACTCATTCCT CGCTGCAACA AGTCTACTAA AGTTTCAACG CTGGAAGATG TTATAGAGTA CGTGAAATCT CTAGAGATGC AAATACAGCA TTATGTGATG AATTTTCGGA TCATGACTGA GGTTTTAATA TCTGAATCGA TGTTGTTATG CAAGATGATG TCAACGGGAT GTAGTACGAT GCCGATGATG TATACATCGA ATACGCAACA GTTCATGCCC CACATGGCCA TGGGGATGAA TCAGACTCCT GCATTCATAC CTTTCCCTAG GCAGGCTCAT ATGGCGGGTG TAGGTCCATC ATATCCACCA CCGCACAACC CTTTTCCAAA CATTCAGACC TTTGACCCAT CCAGAGGTAG GTTACAAAGT CCGCAGCCTA ATCCGGTGCC GAACCGACCT CAGATGAATC CTTATAGCCA GTTTGTAGGC CACCACCAGA TACAACAACC TTCTTTTCCT CCATTGCAGA GTCAAACAAC ATCACAGCTG AGCTTCGGCC AGGCAAGTAG TAGCAAGGAA CCTGATGATC AGAACAACCA ACCACAAGGT TAGAAAGAAT CAGGGGATGA CCT |
| Length | 5383 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 5205557.. 5218269 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G28811.1 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg481664 | transposable element gene |
| 5.47723 |
Ahg314403 | C2H2 type zinc finger transcription factor family |
| 10.4881 |
Ahg475096 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 10.9545 |
Ahg892274 | SGNH hydrolase-type esterase superfamily protein |
| 12.4499 |
Ahg936575 | |
| 13.8564 |
Ahg942510 | transposable element gene |
| 14 |
Ahg477310 | Thioredoxin superfamily protein |
| 14.4914 |
Ahg475609 | photosystem II reaction center protein H |
| 14.4914 |
Ahg475557 | photosystem II reaction center protein H |
| 15.2971 |
Ahg906792 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|