| Annotation |
|---|
| Description | jgi|Araly1|472824|fgenesh2_kg.1__2778__AT1G25470.1 |
| Sequence |
AAGAACAGGA ACAGTAAAAG TCGGATTTTT GGGTTTCAGA GAAGCAATCG GAGAACAACA ACGGCGTTTG TAACGCGGAT TTTATGTCGG CTGTGTCTGA ATCGGCTGTG ATTTCGTCTC TGTTTCTAAT CTCCTTTGCA ATTCAATCGT CTTCTTCGTC GTCTGTCTTG TTCTTTGGTC TGAGTCTGAC CGCTGTTCTT AACGCTCTTC GCTTCTGCTC GGAACAGAGG CTTATTCTTG AGGTTCCTTC CATTTCCATG GGCTTAAGGC TAAAAAGGAC TTGTTCTGGT GTTGAAGTAT TTGGGGGTTT TCACGAAAAG CAAAAAATAC CCTTTTTCAT AGTTCGCTGA AACACCTCAT CCGATTTAGC AGTTTTGATC AGAAGTTTTG AGTGGGTTTT TGCTGTGTTC TTGGTTTGTT TGAAAAGATA TGAAGTCCTT TGTGAAACCT GAGAAAGACT CTTTGTTGAG AACAGTCCGT ATTATTTTCA CTGATCCTGA TGCTACTGAT GATTCCTCTT CCTCTAGCGA TGAATGGTTA CCTAAACCTC GAAAGGTAAA GCGTTTTGTC CATGAGATTA CTTTCCTCTC TCAGGTCTCC GAGAGTTCTC AGGATCGTAG CAATGCTATC AAAACCCCTA GAAAGAATAC CAGGCAGTTA AAGTATCCTG TGGGAGTTAG GTCGAGGCCA TCAGGCAAAT TTGCTGCTGA GATTATGAAC CCATTCACTA AAACTAAGAA ATGGTTGGGT ACTTATGAAA CTCCTGCAGA AGCTGAGAAG GCTTATGTTG ACAAGAAGGT TGAGTATAAT GCATTGGCCT CTTCAGGTTC TGCTGTTTCC TCATCGGTTG TATCAGTGAC TAGCCAGTGC TTGCGTTCTC CTGCTTCTGC TTCTGTTTCT TGTGTCAGTG CTGATGATTT GTCTAAAGAA AAGTCGACTC TGAACAAAGA TGTTGCTGCG TCTAGTGATG ATTCAACCAA GGAAGTTTTC ACCACTTTCG ACTTTTCCGA TCTGAAAATC CCTGATCTGA GATTCTTAGC AGCAGAAGAG GATTCTATGA TTTCTGATGC AAATGGTGCA GAGCTAGACT TTGATTGTAT TCTTTCTGCC GAGTGTAACC TTCTGCTGGA TGATTACTCT TTGCTCGATA ATGGTTTCAA CATCAGCGGG TTTGAAAACA GTCTTCCAAG TGAGCTACCT GACTGCGATT TCACTGAAAT GGAACGCGAG CTTGATGATT TCAAATTTGC CTATGCAGAT CAACTGACAA CACCGCCTCT CGAGTTCGGT TGTGTTTAAC TTCGTATCTC TTTTGTCTCT TCGTGTCGTA CTCTCTTTTA ATGTTGTCTA ATCAGGACAG AAAATCTAAA CC |
| Length | 1372 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11004046.. 11005760 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G25472.1 |
| Description | conserved peptide upstream open reading frame 54 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF54 represents a conserved upstream opening reading frame relative to major ORF AT1G25470.1 |
| Alias | [CPuORF54][conserved peptide upstream open reading frame 54] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 20 |
Ahg939679 | Galactose oxidase/kelch repeat superfamily protein |
| 23.9374 |
Ahg470669 | glucan synthase-like 7 |
| 52.4786 |
Ahg484195 | sucrose transporter 2 |
| 71.4563 |
Ahg343136 | UDP-glycosyltransferase 73B4 |
| 79.2465 |
Ahg897208 | homolog of histone chaperone HIRA |
| 85.5336 |
Ahg487736 | |
| 85.6971 |
Ahg490126 | sensitive to freezing 6 |
| 86.3481 |
Ahg480697 | zinc finger (Ran-binding) family protein |
| 89.9667 |
Ahg470369 | HXXXD-type acyl-transferase family protein |
| 90.9395 |
Ahg491023 | oxidoreductase, 2OG-Fe(II) oxygenase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|