Detail



ID : Ahg473017

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473017|fgenesh2_kg.1__2971__AT1G28110.2
Sequence
CATCACTTGT CTCCTCTTCC TTCTTCTCAA AACCAAACAC AACAAGAAGT GACATCATGT CTCCTCCTCT CCAATGGCTC ACAATCTCCT TTGCTCTAAT TCTCTTCCAC TCTCTTATGG TCTCCTCTAG TGTTCTGTCC CACTCCGATC GGGTCACCCG TTTACCCGGT CAACCCCGGG TCGGATTCCA GCAATACTCC GGTTATGTCA CTGTCGACGA CAAGAAACAG AGAGCCCTGT TTTACTACTT CGCCGAGGCA GAAACCAATC CATCCTCTAA ACCTCTCGTC CTCTGGCTCA ATGGAGGACC TGGATGTTCA TCTTTGGGTG TTGGTGCATT CTCAGAGAAT GGACCATTTA GACCAAAAGG ACCAATCTTG GTCAAGAATC AACATAGCTG GAACCAAGAG GCTAATATGT TGTATTTAGA GACACCTGTT GGAGTTGGAT TCTCTTATTC AACTCAAAGC TCCCATTATG AGGGTGTTAA TGACAAGATC ACTGCAAGAG ACAATCTTGT GTTCTTGCAA AGATGGTTCC TCAAATTCCC TCATTATCTC AATCGAAGTC TCTTCATCAC TGGTGAAAGC TATGCTGGCC ATTATGTTCC TCAACTAGCT CAGCTTATGA TTCAGTACAA CAAGAAGCAT CATTTGTTCA ATCTGAGAGG AATTGCTATT GGCAACCCGG TTTTGGAGTT TGCAACGGAT TTCAATTCGC GCGCTGAGTA CTTCTGGTCT CATGGCTTGA TATCTGATTC GACTTACAAA ATGTTCACAT CTTACTGTAA TTACTCGCGC TATGTGAGTG AGTACTATAG AGGGTCAATG TCTAGTATGT GCTCTAAAGT GATGAGTCAA GTTAGCACTG AGACAAGTCG GTTTGTCGAC AAATATGATG TTACTCTCGA TGTTTGCATT CCCTCTGTGC TATCTCAATC CAAAGTAGTA AGCCCCAACC AAGTGGGAGA ATCTGTGGAT GTTTGTGTCG AAGATGAGAC GGTTAACTAT CTAAACCGAC GAGATGTGCA GGAAGCTCTT CATGCTCGGC TCATTGGAGT ACGTGAATGG ACAGTTTGCA GCAATGTGCT TGATTACCAA TTGCTTGATG TGGAAATACC AACAATTAAT ATCGTAGGGA GCCTTGTTAA AGCAGGAGTT CCAGTTCTTG TCTACAGTGG AGATCAAGAT TCTGTGATCC CTTTGACCGG AAGTAGAATT TTAGTCAGCA GATTGGCCAA ACAATTGGGA CTGAGAACAA GTGTACCTTA TCGAGTCTGG TTTGCAGGAC AACAGGTTGG CGGGTGGACT CAAGTCTATG GGAATGTCTT GTCATTTGCA ACGGTGCGAG GAGCTTCACA CGAGGTCCCA TTCTCACAGC CTGAGAGATC ACTTGTTCTG TTCAAGGCGT TCTTGGACGG TCATCCTCTT CCTGAAGAAT TCTGATATTT ACCATGATTT GTTGAGCTTA TGGGTAAATT ACAACAGGAG CTTCTACTTG CATTGTTAAG CATTTGAATT GAAGAGCTAT GATTGGTTTC GATAGCATCA CGGCTACGCT TAGCCGCCTT TCATTTTCAA GTGACTCTTG TGATGTGGGA TTCTGTTCTG AAAAAATCTC TGTCTCATCT TCCAAAGCCC CTGAGACAAC CGCAGGTCTC ACCGGCCTCA CCCTGCAAAA TTCAATACAA ATCCCTTCTA ATAAGATTTC TTCGCTATTC TATCTAATGT TCTTAAGTAG AAGCAGTGGC AGCACCTGCA GTGGAGGTGG CATGAGTATT TGAGCAGGTT TGAGT 
Length1795
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11725107.. 11728335
Download Sequence
A.thaliana
AGI-codeAT1G28110.1
Descriptionserine carboxypeptidase-like 45
TAIR curator summary
Alias[SCPL45][serine carboxypeptidase-like 45]
Gene coexpression
MR
MR Locus Description
25.9422 Ahg920750 Pathogenesis-related thaumatin superfamily protein
37.9473 Ahg314295 Flavoprotein
39.4462 Ahg496451 tubulin beta chain 2
42.9185 Ahg470918 syntaxin of plants 111
45.5631 Ahg481360 early nodulin-like protein 14
49.1325 Ahg323362 HNH endonuclease
63.2456 Ahg496307 Leucine-rich repeat protein kinase family protein
64.4205 Ahg481044 ribonucleotide reductase 1
64.8999 Ahg491044 PLAC8 family protein
64.9923 Ahg481700 alpha-L-fucosidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression