Detail



ID : Ahg473020

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473020|fgenesh2_kg.1__2974__AT1G28130.1
Sequence
ACCAAAATCC AACCATCAAG AACAGAGAAG AAGTGATTCT CTCAACAACA AAAATAAAAT AAAAACTCTC TTTCTCTATT TTTTCTTACT TGAACTCATC ATTGCAACAC AAACTTAAAA CTTTGTTTGT GTCTGCTTTC AGACAATGAT ACCAAGTTAC GACCCAAATG ATACAGAAGC TGGCCTCAAG CTTCTCGATG ATCTGACAAC AAATGCAGAG ACTATTCAAC AACAAGTTCT TCACCAAATA CTCTCTCAAA ACTCTGGAAC TCAATATCTC CGAGCATTTC TCGATGGAGA ATCCGACAAG AATCAACAAA GCTTCAAAAA CAAAGTCCCT GTGGTGAATT ACGACGACAT AAAGCCTTTC ATTCAACGAA TCGCTGATGG AGAATCATCT GATATCGTCT CTGCTCAGCC CATCACAGAA CTCCTCACTA GCTCGGGGAC TTCTGCAGGA AAGCCGAAGT TGATGCCTTC TACAGCTGAA GAATTGGATA GGAAGACATT TTTCTACAGC ATGCTTGTGC CTATCATGAA CAAATATGTG AATGGGCTAG ATGAAGGAAA AGGGATGTAT CTTCTATTCA TAAAACCAGA GATCAAGACT CCTTCAGGTC TAATGGCGCG TCCTGTTTTG ACTAGCTACT ACAAAAGTCA ACATTTTAGG AACAGACCCT TCAACAAGTA CAACGTCTAC ACTAGCCCTG ACCAGACCAT TCTTTGTCAA GACAGCAAAC AGAGCATGTA CTGTCAGCTT CTCTGCGGTT TAGTCCAGCG ATCTCATGTC CTAAGAGTCG GAGCTGTCTT TGCCTCTGCC TTCCTTCGAG CGGTCAAGTT CTTGGAGGAT CATTACAAAG AGCTTTGCGC TGACATTAGA ACCGGTACTG TCACTAGCTG GATAACTAAC TCATCCTGCA GAGACTCGGT CTTGTCGATC CTTAACGGCC CAAATCAAGA ATTGGCTGAT GAAATTGAGA GTGAGTGTGC TGAAAAGTCG TGGGAAGGAA TCTTGAGGAG GATCTGGCCT AAGGCTAAGT ACGTTGAGGT GATTGTGACG GGTTCGATGG CTCAATACAT TCCCACACTC GAGTTTTATA GCGGAGGTTT ACCATTGGTT TCAACGATGT ATGCTTCCTC TGAGTGTTAC TTTGGTATCA ACCTCAATCC GTTGTGTGAT CCAGCCGATG TTTCCTACAC GCTTCTTCCT AACATGGCTT ACTTCGAGTT CTTGCCCGTC GACGACAAAT CCCACGAAGA GATTCACTTT GCGTCGCATT CCAACACGGA TGATGATGAT GATGCTCTCA AGGAAGATCT TATTGTTGAT CTTGTTAACG TCAAAGTCGG TCAATACTAC GAAATTGTCA TTACTACATT CACAGGTTTA TACAGATACA GAGTTGGCGA TATCCTAAAA GTGACAGGTT TCCACAACAA AGCGCCTCAA TTCCGTTTCG TCCAGCGAAG AAACGTTGTA CTAAGCATTG ACACCGACAA AACGAGCGAG GAAGATCTAC TAAATGCGGT GACACAAGCT AAACTCAACC ATCTTCAACA CCCTTCAAGC CTCTTGCTCA TGGAGTACAC AAGCTACGCG GACACGTCAT CAATCCCGGG GCATTACGTG CTCTTCTGGG AGCTAAAGCC ACGTCACAGT AACGACCCAC CAAAGCTAGA CGACAAGACA ATGGAAGATT GTTGCTCTGA GGTTGAGGAT TGTTTGGATT ACGTCTACAG AAGATGCAGG AACAGAGATA AATCGATTGG ACCATTGGAG ATAAGAGTGG TGAGTTTGGG CACGTTTGAT TCGTTAATGG ATTTTTGTGT CTCACAAGGA TCATCTTTGA ATCAGTATAA GACTCCAAGA TGTGTTAAAT CTGGAGGAGC TCTTGAGATT CTTGATTCCA GAGTTATTGG GAGGTTCTTC AGTAAGAGAG TTCCTCAATG GGAACCACTT GGTTTAGATT CTTAGACTTT ACTTCTTTTT TTTAATGTAT GATTAAAGTC TTGATTTAAG TATAAGAACT TCATTTGTTA AGTTGCTAAT TGGTGTTTTT TTTTTTTTTT TAAAGCTTTT GCTCTTTTGT CTCTTTTGTA ACAAATTACT TTCAGCAAAG TCCTCTCATT TTGTGAATGT ATACTTTTGT GTCTCTTTCT TTATT 
Length2165
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11749151.. 11751987
Download Sequence
A.thaliana
AGI-codeAT1G28130.1
DescriptionAuxin-responsive GH3 family protein
TAIR curator summaryencodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.
Alias[GH3.17]
Gene coexpression
MR
MR Locus Description
24.1247 Ahg351609 Protein of Unknown Function (DUF239)
25.0998 Ahg483104 LOB domain-containing protein 15
28.5657 Ahg479447 Leucine-rich repeat (LRR) family protein
38.923 Ahg890287 Protein of unknown function (DUF1264)
45.4973 Ahg337040
47 Ahg925774 myb domain protein 20
51.1664 Ahg311290 Phosphatidylinositol-4-phosphate 5-kinase, core
51.7687 Ahg323966
58.9237 Ahg895302
62.2254 Ahg495065 ethylene response factor 110
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression