Detail



ID : Ahg473066

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473066|fgenesh2_kg.1__3020__AT1G28490.1
Sequence
GGTGATGCGT TTTGCTATGT AAGAGAGACG AATCTGACGC CGGAATCCTT TTTAGTGCAC CGTCGTTTGT TCTCCGTCGC GTCACGTTTC GATTAATTCC TTCACAAGGT AAGAAGCTTC TTCAATTTTC GGGATGTCTT CTGCTCAAGA TCCATTCTAC ATTGTTAAAG AAGAGATCCA GGATTCTATT GATAAGTTGC AATCAACATT CCACAAATGG GAGCGTATCT CTCCCGACAT GGGGGATCAA GCGCATGTGG CGAAGGAGCT TGTTGCTACT TGTGGAAGCA TTGAGTGGCA GGTAGATGAG CTGGAAAAAG CGATTACTGT TGCAGCTAAA GATCCTTCAT GGTATGGTAT TGATGAAGCT GAGCTTGAAA AACGGAGGAG ATGGACTAGT AATGCTAGGA CACAGGTGCG GAATGTGAAG TCTGGTGTTT TAGCTGGAAA GGTTAGTTCT GGAGCTGGTC ATGCAAGTGA AGTGCGCAGA GAACTGATGA GAATGCCAAA CTCGGGTGAA GCAAGTAGAT ACGATCAGTA TGGAGGGAGA GACGATGACG GTTTTGTACA GTCAGAATCG GATAGGCAAA TGCTGTTGAT AAAGCAACAA GACGAAGAAT TGGATGAGCT CAGTAAAAGT GTACAGAGAA TTGGAGGAGT GGGGCTCACT ATACACGATG AACTCGTTGC ACAGGAGAGA ATAATAGATG AATTGGATAC GGAGATGGAC AGTACAAAGA ACCGGCTGGA GTTTGTTCAG AAAAAAGTGG GAATGGTAAT GAAGAAAGCT GGAGCAAAAG GTCAAATGAT GATGATATGT TTCTTGCTCG TCTTGTTCAT CATCCTATTC GTTCTTGTCT TCTTGACCTA AAGACCGAGC CACTGGATCT TATAGATGGG AGTTTAATGT CTTACATTAT CATATGTTTT TGGTGAAACA AAAGGAATAT TTACATAAGG TTGTCTGTTT TTTCTTCTCT TATCCAATCC CATATCTAAT TTTGAACTTT 
Length1010
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11965857.. 11968017
Download Sequence
A.thaliana
AGI-codeAT1G28490.1
Descriptionsyntaxin of plants 61
TAIR curator summaryEncodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.
Alias[ATSYP61][OSM1][SYP61][syntaxin of plants 61]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg490258 Galactose oxidase/kelch repeat superfamily protein
8.544 Ahg491411 nuclear poly(a) polymerase
11.8743 Ahg474167 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
15.4272 Ahg483124 PRP38 family protein
15.8745 Ahg944648
16.4317 Ahg477298 hydroxyproline-rich glycoprotein family protein
19.4422 Ahg916256 KRR1 family protein
22.1359 Ahg945006 pathogenesis related homeodomain protein A
24.5357 Ahg479493 Vacuolar sorting protein 9 (VPS9) domain
28.3196 Ahg484347 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression