Detail



ID : Ahg473098

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473098|fgenesh2_kg.1__3052__AT1G28760.1
Sequence
ATGGCTACTT CTTCTTCCTT TCTTCGTCTT CCTCATCGAA TCTGGTTTCT CCTTCCTCTT GTTGTCTTTC TCTTGTTATC CTACGCAGCG GCGCTCAAAA GTGTTGGTCC TAGCGAGCCA GCTCTGAATG TTAGCCTTAG TCCGTGTGAG CGAATCCAAG TCTCAGGCTA TTCGAGAACC AAATTAGGGA AATTCGCTAA CTCTCTTAGG GTAAACTTAG TTCCAATCCC AGAGAAGCTA CACATCAAAA TTCAAGTTTG TGTTCACCGG AATGCTACAC TTGGAATGTG TCAGTGTGAG AAATCAAATT GGAAAAATCT TCAGAGCAGC TCTGTAATAT CTCCATATGA TAAACAATAC ATTGATGTGA GATTCAGTGG TAGTGAATAT GAATCGTCTC GTTCACTGGT TACAATCAAC GTTACAGAAG AGTTTCATCA ATGGCGGATT TTTTGTCTTG TGGCGGGATT GATTGTGATT TTGTTAGCAC CTGTTGTTAG CAGTTGGCTA CCTTTTTACT ATACGAGTTC TATGGCGGTT GGTGTTTTTC TCGTTGTTTT GATTATTATC TTCCAGGTTA TGAGGCTATT GCCTACTGGG AGGAAAAATG TTATGTATCT TGCGTTTTAT GGATCTGTGG TTGGTGCTGG ATCTTTCATT TTACATCAGT TCTCAATGAT GGTGAATATG ATTCTTGTTA ATTTCGGGTT GAGTGAGGAT ATGTATAATC CGGTAGCGAT TCTTGTGCTT GTTGGGGTAG TTATTACTGG AGCTGCTTTT GGATTCTGGA CTGTGAGGAA ATTTGTTGTT TCGAAAGATG GAGGAGGTGT GGATGCTAGT GTTGCACAGT TTGTGAAATG GGCGATGCGG TCTGTTGCTG CTACGTTTAT TTTACAGAGT AGTCTTGATA CTCCTATGGC GATGGGAGCT TTTGTTTTAG CTAGCTTGCT TGGTTTTCTT GTTAGTAAAA CGAAAAGCTT TGTAGCTCAA AGTCATTGGC TGGTTTCTGC TAGTGAGACA CGTCCAATAA TGCATGGACG AGCTGAGTTC CTTAGCCGCC CTGGGGGAGA TGGACTGTGG AAGAGTGCTA GGAGAGTACC TTCATATTCC GGCTCTCCTT CTTACGATGT GAGCTCACCA TCTTCAGTTA ACCGGAGAAC ACCAATCGGA AATCAGGATT ACTATTCTAC ATTCCACAGG ACGCCAAACC GGAAGAAGAT GTCAAAGAGA GAGTATGAAG AATTGACACA AGAAACGACA CGGGAAGCAA TGGCAGGACT TGCAGCTTCT CCAGGATTCA GTGATTGGTT AGTTGAGCAT GCTGACAGAA TCAAGTTGCT TCCCACTGAG AGCTATGATG ACGAATTGGG TAGTGAATCA GATTCAACCG GTGAACAATC TTGGACAGGT TTTTTCTGGT AG 
Length1422
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12056157.. 12057234
Download Sequence
A.thaliana
AGI-codeAT1G28760.1
DescriptionUncharacterized conserved protein (DUF2215)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.2809 Ahg928919
24.98 Ahg492862 Pentatricopeptide repeat (PPR) superfamily protein
30.5941 Ahg486707 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
41.1096 Ahg491314
42.6028 Ahg927817 exportin 1B
46.8615 Ahg924903 Protein of unknown function (DUF761)
47.0319 Ahg491573 ubiquitin-specific protease 18
58.6856 Ahg944727 Regulator of Vps4 activity in the MVB pathway protein
60.2993 Ahg948161 RGPR-related
68.0441 Ahg889766 auxin response factor 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression