| Annotation |
|---|
| Description | jgi|Araly1|473111|fgenesh2_kg.1__3065__AT1G29050.1 |
| Sequence |
TATATATATG TATATGCATT GGTGCATATA TACATAGACA AATGGGTGTA TAAAAGCTTG AACCCATCAA ACAAGCTTCA TCACAAAAAC CCAAAACCTT TGATATTTGT TTAATACAAA AAGATGGGTT TCAAACTCAT CTCTCTCCTC CTCCTTTTTC TTCCACTTCT AACAGTCACA ATCTTGTCGG GAACCGAGCA AGCCTTCGCT TCCGACAAGA CACTCCTCGT GACCGGCAGC AACAGCACGG CTGACGGTGG AATGTCGTCA CTGAGAGGGA AGAAACAGAG GAGAGCATCA GGATGTAACT TGTTCCAAGG TCGATGGGTG TTCGATGCTT CTTACCCTTT CTATGATTCG TCCACGTGTC CTTTCATCGA CGGCGAGTTT GACTGTCTCA AGTTCGGCCG ACCAGACAAA GAGTTCCTCA AGTACTCTTG GCAACCTGAA TCTTGCACCA TCCCAAGGTT CGACGGTGGG GCGTTTCTGA GGAAATACAG AGGGAAACGA GTCATGTTCG TCGGAGACTC ACTGAGTTTA AACATGTGGG AATCGTTGGC CTGTATGATA CATGCGTCGC TACCAAACGC CAAGACCACT TTTCTCAAGC GTACCCCACT CTCTACTCTC ACTTTCCAGG AATATGGAGT AACGTTACAC CTATATAGAA CACCATACAT AGTGGATATA TCCAAAGAGA GAGTAGGGCG TGTGCTTAAC CTTGGAGCTA TTGAAGGAGG TGCTAATGCT TGGAAAAACA TGGACGTTCT TGTCTTCAAC TCTTGGCATT GGTGGACTCA TAAAGGCCAA TCTCAAGGGT GGGATTATAT TAGAGATGGG TCGTCTTTGG TGAGAGACAT GAACCGTCTT GATGCTTTCT ACAAAGGACT CAGTACTTGG GCTAGATGGG TTGATCAAAA CGTCGATACT ACCAAAACTC GAGTTTTCTT CCAAGGCATT TCTCCCACTC ATTACGAGGG AAGGGAATGG AACGAGCCAA GGAAGAGTTG TAGTGGGCAA ATGCAGCCGT TGGGTGGATC AAGTTACCCA AGTGGTCAGC CTCCATCTGC GGGAGTTGTG TCCAAAGTGT TGAATTCGAT GAAAAAGCCA GTGACCTTGC TCGATATCAC CACTTTGTCC CAGTTGAGAA AAGATGCTCA TCCTTCTTCT TACGGTGGCA ATGGAGGAAC AGATTGCAGC CATTGGTGCC TCCCCGGGTT GCCAGATACT TGGAACCAAC TTCTCTACGC AGCCCTTACA ATGTGAAGTA TAAGAATCAC AACTATAAAG AAAGTGCATA ACACCTTTAT TCTGTAAATG ACATTCGTAA ATCGTTTAGT GTTGTGTGAT GCAATAGAAA AAAAGATTCA AAAACAAAAG AGACATTCTC AGTATAAATA ACACATTGAT TTGGT |
| Length | 1415 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 12097687.. 12106756 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G29050.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 38 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL38][TRICHOME BIREFRINGENCE-LIKE 38] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 27.3679 |
Ahg926057 | |
| 28.3725 |
Ahg938383 | Class I glutamine amidotransferase-like superfamily protein |
| 31.749 |
Ahg496326 | Integrase-type DNA-binding superfamily protein |
| 32.249 |
Ahg890379 | purine permease 7 |
| 33.0454 |
Ahg483411 | isopropylmalate isomerase 2 |
| 33.9706 |
Ahg926058 | |
| 40.694 |
Ahg475309 | |
| 41.3521 |
Ahg493941 | |
| 42.0357 |
Ahg489767 | Pollen Ole e 1 allergen and extensin family protein |
| 44.0908 |
Ahg483019 | Subtilisin-like serine endopeptidase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|