| Annotation |
|---|
| Description | jgi|Araly1|473343|fgenesh2_kg.1__3297__AT1G30970.1 |
| Sequence |
GAATCTGAAG ATCGTAGAAG AAATCGAAGA AACGCTTTGT ACCAATTAGA AACCCTAGCG AGCGGAGGAA GGAGACAAAG AACGAGACTT TGAGAGACGA GAGAGAGATT TCAATTAGAA TCGTGAAATC AATACATAAG AGAAAGGTTT AGTGATGGGT AAGAAGAAGA AGAGAGCTTC AGAGAAGGTG TGGTGTTATT ACTGCGACAG AGAGTTTGAT GATGAGAAGA TTCTTGTGCA GCATCAGAAA GCTAAGCACT TTAAGTGTCA TGTCTGTCAT AAGAAGCTTT CTACAGCTAG TGGCATGGTG ATTCATGTTC TTCAGGTTCA TAAAGAGAAT GTTACAAAGG TTCCTAATGC TAAAACGGGT CGAGATTCAA CTGATATTGA AATATATGGA ATGCAAGGAA TTCCACCCGA TGTCTTGGCT GCTCATTACG GAGAAGAAGA GGAAGAGCCT CCAGCCAAAG TTGCAAAAGT TGAGATTCCG TCCGCCCCTC TTGGTGGTGT AGTTCCTAGA CCATATGGAA TGGTATATCC GCCTCAACAA GTTCCTGGTG CTGCACGACC AATGTATTAT CCTGGTCCTC CTATGCGTCA TCCTGCTCCT GTATGGCAAA TGCCACCTCC TCGTCCACAA CAATGGTATC CACAAAATCC AGCTCTTTCT GTACCTCCAG CTGCCCATTT AGGGTATCGA CCACAACCAC TTTTTCCTGT TCAAAATATG GGGATGACTC AGCCAACCTC AGCTCCTGTC GTACAACCTT CACCAGTCAC TGGAGTAACT CCTCTTGGGA TTCCTTCATC ATCACCTGCA ATGCCGGTTC CTCAACCTCT GTTCCCTGTT GTGAATAACA GCATTCCTTC TCAAGCTTCA CCATTTTCTG CTCCTCTGCC TGTTGGTGGG GCTCAGCAAC CGTCTCATGC AGATGCTTTA GGATCAGCAA ATGCTTATCC ACCTAACAAT TCTATTCCAG GTGGGACTAA TGCTCATTCT TATGCCTCTG GCCCAAACAC TAGCGGTCCT TCAATTGGTC CACCTCCTGT AATTGCAAAT AAAGCTCCTA GCAATCAGCC TAATGAGGTC TATCTTGTAT GGGATGATGA AGCGATGTCT ATGGAGGAAA GAAGAATGGC CTTACCGAAA TACAAAGTGC ACGATGAAAC CAGCCAGATG AACTCAATAA ATGCAGCCAT AGACAGACGA ATCTCAGAGA GTAGGCTTGC TGGGCGAATG GCGTTTTAGA ATTTGGCACC AAACCAAACC TGCGTCAAAG AAAAGGCGAT ATGATGGGGG GCTTTGTTAC AACAAGTCTT CATTCACTTT TGTTCAGATT TTCAGATACT GAATTTATGA TCTGATTTTA AGTTATTACT TTCCATCTGT TGTATTCTTT AGCCAGGTGA GTTAGTTTTT TAGGGATGTC AGAGATGTTT TTTCTCAGAA GTTTAGTCCT TTTTTTTTGT CGTTGGAGAC TTGGAGGAAG AACTTTGTCT CCTTTTCTTC TGAATTGATC AAAGTATTAT ATTATACAGA TTCACCCAAA ATATTTGCA |
| Length | 1559 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 13384090.. 13387661 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G30970.1 |
| Description | zinc finger (C2H2 type) family protein |
| TAIR curator summary | Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus. |
| Alias | [SUF4][suppressor of FRIGIDA4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg470511 | NAD(P)-binding Rossmann-fold superfamily protein |
| 3.74166 |
Ahg950851 | DEA(D/H)-box RNA helicase family protein |
| 5.47723 |
Ahg941463 | E1 C-terminal related 1 |
| 9.8995 |
Ahg488895 | golgi nucleotide sugar transporter 4 |
| 10.9545 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 12.4499 |
Ahg491436 | La protein 1 |
| 13.3041 |
Ahg926777 | Phosphoribulokinase / Uridine kinase family |
| 16.3095 |
Ahg356289 | SMAD/FHA domain-containing protein |
| 17.3205 |
Ahg493655 | Tyrosine transaminase family protein |
| 18.0278 |
Ahg940109 | Protein of unknown function DUF106, transmembrane |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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