Detail



ID : Ahg473398

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473398|fgenesh2_kg.1__3352__AT1G32170.1
Sequence
CCCCACACCA AAAGAAAAAC CTCTCTCTCT TATGTCAAAA GAAAACACAA ATCATAAATC TTTTTTTTTT TCATTCCCAG AAAGAATGTC TAAATCATCG TATAATAACA TCTTTTTCAT CATCATCTTG ATCTTGGGTT TGGGTTTGAG ATCATCATTA GCCTTCACGA ATCTCAACAG CTTAAGCTTT GAAGAATCAC TTTCTCCTCT CTTTGGCGAT GCAAATCTCG TCCGTTCTCC TGATGATCTC TCTGTTCGTC TCCTCCTTGA TCGATATACC GGTTCTGGTT TCATATCATC GAATATGTAT CAACATGGAT TTTACAGCTC CATGATCAAG CTTCCCGCTG ATTATACCGC CGGCGTCGTC GTCGCATTTT ATACATCAAA CGGGGACGTG TTCGAGAAAA CACACGACGA ATTAGACATA GAGTTTCTAG GGAACATAAA AGGAAAGCCA TGGAGGTTTC AGACAAATCT ATACGGAAAT GGAAGTACAC ATAGAGGTCG TGAAGAGAGA TATCGTCTCT GGTTCGATCC TTCTAAAGAG TTTCATCGTT ATAGCATTCT CTGGACTCCT CACAAGATCA TATTTTGGGT AGATGATGTG CCAATAAGAG AAGTGATCAG AAACGATGCA ATGGGAGCAG ATTATCCGGC GAAGCCAATG GCTCTTTACG CCACCATTTG GGATGCTTCC GATTGGGCTA CTTCCGGCGG CAAATACAAA GCTAATTACA AATTTGCCCC TTTCGTAGCC GAATTCAAAT CTTTCTCTCT TGACGGCTGC TCCGTTGATC CTATCCAAGA AGTTCCCGTG GATTGTTCCG ACTCAGTCGA TTTCCTTGAG TCTCAAGATT ACTCTTCCAT TAATGCCCAT CAACGAGCTG CCATGCGAAG ATTTCGACAA CGTTTCATGT ACTATTCTTA CTGTTACGAT ACACTTAGGT ATCCTGAGCC TCTGCCAGAG TGTGTCATTG TTCCGGCCGA GAAAGATAGG TTTAAGGAAA CGGGAAGGTT GAAATTTGGT GGTACGGAGG CGCGTGAACG GCGGAGAAAT CGACGGCAGC AACGTCGGCC TGAGATTGAG ATTGAGAGTG ATCCTGACGA CAGAAAACTT TTATAAGATT TGTTTGTGCC ATTTTTTTTA CTTAAGATTC GTTTGTGAGT A 
Length1171
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13887891.. 13890382
Download Sequence
A.thaliana
AGI-codeAT1G32170.1
Descriptionxyloglucan endotransglucosylase/hydrolase 30
TAIR curator summaryxyloglucan endotransglycosylase-related protein (XTR4)
Alias[XTH30][XTR4][xyloglucan endotransglucosylase/hydrolase 30][xyloglucan endotransglycosylase 4]
Gene coexpression
MR
MR Locus Description
15.6844 Ahg482777
25.8457 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
42.638 Ahg929930
43.2435 Ahg491342
53.591 Ahg949254 glutamate receptor 1.3
53.6004 Ahg933747
58.2409 Ahg950441
60.1581 Ahg491067 Rhodanese/Cell cycle control phosphatase superfamily protein
61.6279 Ahg927491
63.0714 Ahg948802 Serine protease inhibitor, potato inhibitor I-type family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression