Detail



ID : Ahg473425

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473425|fgenesh2_kg.1__3379__AT1G32361.1
Sequence
ATGTATGACC TTACCTTTCT CCTCATTTCT CTCTTCCCCA CTGACATTAC CCTTCCCACA CGGCAACCTC AGAATAAACC CTTTCTTCTT CCTCAAGCTA CCTATGAAAC CAGTCACAAT ATTTCTGATC CGACCGTTTC ACTACACGGT CTCAAAATGT CTTTATCCAC GACCGAGACA GACAATTTCA AACCAGTACA CACCCTCGTT TCCTCCCCGG TCACCATAGT TTTGACCGGT AGTCTTCTCT TCATCATTTT CACCGGTTTC TTCTCCTTCT TCTTCTGTGG ATGTTTATTT AGGAAACTCA TGAAGATTTG GAATAACCAT CGAAACCGAA ACCGAAACCG TCCTAGTAAC CTAATCCAAC CGTCTAATCC ACCCGAAAAC CTCGGTCTCG ACTCCAAGAT CATTGAATCC TTCCCTGAGT ATCCGTATTC GGTGAAAGAT CATGGGACGG ATCAATGTTC CATTTGTTTA ACAGAGTTTA TGGATGATGA CACCATTAGG CTCATTTCTA CTTGTAATCA CTCCTTCCAC ACAATTTGCA TTGATCTTTG GTTTGAAGGA CACAAGACTT GCCCGGTATG CAGGCGTGAG CTTGATGTAG AAGACCGGAC ATCGCTAGAA AAGCCGATAG AAGCTCCTGA AATCGATCTA GTTAGATCTG AAATCCACGA CGAGCCTTTG CCCCGTGACA CATTGACAAT CATCGTTCAC GAGGAGCATC CTACTACTAC TATTGGTAGT TTAGAGCATA CAGATGAAAT CGAAAGCTAT GAAAGACGAA TGAAAGCATC GAATTTACGG TTTTGGAGGT CGCATTCTAC TGGACATTCT ATAGTAGTTA AGACCGAAAA CGAACAAGAA GAAGAAGAAG AAGAAAAAGA TGAGATTAAG ATACATATTG AGATTTCTGG AGAATGTCAG TTTGAAGATC ACAAGATGAC TTTACCAAAC AGAAAGTTGT ATTGCGTTAG GGGAACTTAC TCTGTAGGAT AGAAGACCGG AATTAGATTC TAGTTTCTGA TATATTCTTT GTTTCAGCTG TCCAATTTTG TAATTGTTTG ATACTATAGG TTATACATAT AGAAGATGTT GAAGATTGTT GTAATATTTG TACTTAAATT CTCATTATTC CAATACAAAT CATACTTTCC TTTT 
Length1164
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14054235.. 14055414
Download Sequence
A.thaliana
AGI-codeAT1G32361.1
DescriptionRING/U-box superfamily protein
TAIR curator summaryPutative RING-H2 finger protein ATL1F precursor.
Alias[ATL1F]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg936560 Galactose oxidase/kelch repeat superfamily protein
4.47214 Ahg911688
10.4881 Ahg949369 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
12.1655 Ahg916649
18.1659 Ahg905663
21.3542 Ahg891289
22.4499 Ahg945121
37.4166 Ahg923713
38.7298 Ahg905912
38.9743 Ahg908717 MATE efflux family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression