Detail



ID : Ahg473486

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473486|fgenesh2_kg.1__3440__AT1G33080.1
Sequence
ATGGACGGAG GAGGAGGAGA GGTGACGGAG ACTCTGCTGA AAAAGACGGC GGAGAATGGC CGAGAAGAGG ATGGATTGGG GATGAAGGAG AAGGTTTGGA GGGAATCTAA GAAGCTATGG GTTGTGGCTG GACCTGCGAT CTTTACGAGA TTCTCTACGT CCGGACTTTC TTTGATAACT CAAGCTTTCA TTGGCCACCT TGGCCCAACC GAGTTGGCTG CTTACTCCAT CACTCTCACC GTTCTCCTCC GTTTTAGTAA TGGTATCTTG TTAGGCATGG CTAGTGCCCT AGAAACACTA TGTGGTCAAG CCTACGGAGC AAAACAATAT CATATGCTTG GGATCTACCT CCAAAGGTCA TGGATCGTCC TCACAGGCTG TACCATTTGC CTCATGCCCA TATACATCTT TTCGGGCCCT ATCCTCTTGG CCTTAGGTCA AGAGGAACGC CTAGTCCGTG TGGCTCGGAT CATAGCTCTA TGGGTCATAG GCATTAACAT CTCCTTTGTG CCTTCCTTCA CTTGCCAAAT GTTCCTCCAA GCTCAGAGTA AGAACAAGAT CATCGCCTAC GTGGCTGCTG TCTCGTTAGG GGTCCATGTC TTGTTGTCGT GGCTCTTAGT GGTTCATTTT GATTTCGGGA TCGCTGGTGC CATGACTTCA TCGCTCATAG CGCATTGGTT GCCTAACATT GCGCAGCTCC TGTTCGTTAC GTGCGGTGGA TGTAAGGACA CGTGGAGAGG ATTCTCTTGG TTGGCTTTCA AGGATCTTTG GCCCGTTTTT AAACTATCAG TATCTTCCGG TGGCATGATT TGCTTGGAGC TATGGTACAA CTCGATCTTG ATTCTGCTCA CGGGAAACTT AAAAAACGCT GAGGTGGCCC TTAACGCACT TGCAATCTGC ATCAATATAA ATGCACTGGA GATGATGGTA GCCTTCGGCT TCATGGCAGC AGCAAGTGTA AGAGTTTCAA ACGAGATCGG GAGTGGAAAC TCTAAAGGAG CCAAATTTGC GACAATAATA GTAGTTTCGA CATCACTTTC AATAGGAATC ATCATCTTCT TTGTCTTCCT GTTTTTAAGA GGAAGGGTTT CATACATTTT TACAACAAGT GAAGCTGTCG CCGCACAAGT AGCCGATCTT TCTCCACTCT TGGCCTTCTC CATTCTCTTG AACAGTGTTC AGCCAGTTCT CTCTGGAGTT GCTGTTGGAG CGGGATGGCA AAAATACGTT ACGTACGTTA ACCTTGCTTG CTATTACCTT GTTGGAATTC CTTCCGGTGT TTTTCTTGGC TATGTCGTTG GTTTACAAGT CAAAGGTGTT TGGTTAGGAT TGATTTTCGG AATCTTCGTT CAGACTTGCG TGCTTACCGT AATGACTATG AGGACAGACT GGGATCAACA GGTGTCTTCG TCGCTGAAAC GTTTGAACCG TTGGGTTGAA CCAGAATCCC CAAGTCGAAA TCAAACTTTA CAAAACGAAT GATTGTGAAG ATTTAAGTAA AACTTGAGTT TGTAATCGAA TTTTAAATCT CT 
Length1532
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14469017.. 14472782
Download Sequence
A.thaliana
AGI-codeAT1G33080.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
44.1248 Ahg351609 Protein of Unknown Function (DUF239)
58.1722 Ahg917658 subtilase 4.13
60.8687 Ahg943595 copper ion binding;electron carriers
69.3397 Ahg952263 copper ion binding;electron carriers
84.9941 Ahg472486 O-fucosyltransferase family protein
95.352 Ahg471537 F-box/RNI-like/FBD-like domains-containing protein
99.6995 Ahg316947 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression