| Annotation |
|---|
| Description | jgi|Araly1|473512|fgenesh2_kg.1__3466__AT1G33390.1 |
| Sequence |
ATGGCGAGTC TGATGGGAGA TGATTGCAAT TTAGATATAA TGCCTCCAAG GAAGAAGAAG AATAAGGGAT CCAATAAGGA TAAGCTGAAT TCAAATAACA ACACGGTTTC AAGTAGATCT CGGAAACGGA AACTGAATTC AAATAAGGAC ACGGTAGTGA GCAAATCTCA GAAACGGAAG CTGAAGAAAT TGGAGGAAGA TAAGGAGAAA GAAATCATCT TTGCAAAAAC CGCCGAGTTG TTAGACACGT ACAAAATATC TGAGGATGTA TCATCGCTAT TACAATCGTC AAAAGTTATA GGAAGATCAG CCACTAAGCT GGAAAAACGA AGGAGAGCAA TGCAACTTTC TAAAGCTGGT GTTGAGACTG AGCATTCTGA CGAATCAGTC GAGCGAAATG ACGATGATGA TTCTTGTATG GACAAACCTA CAACACCGGA ACATGTTGAA ATCGAAATCC CAACTTTTGT AACTTATTCT GAGCAACAAC TGGTTCATGA GCATGAACTC GGTTCTGATC TAATGTTTTC TGCTGAAGAA ACTAGTAGCA AGCTCGTGGT AGACGACAAT GTGGATATGA TCCTACAGAC AACTTGTCGT GATGATGAAG AAGACTCACA AAGAATGGAT GGGACCATTG AGAATGAAGA TGTAACTGTA CAAGGACCTC GTGTGCCCGC GTTTGTAGTT CATGTTTTGA GACCAGCCGA AGTTGAAGAG ACGAGGAAGG ATCTTCCGAT AGTAATGATG GAGCAAGAGA TAATGGAAGC TATTAATCGT CACCCCACAG TTATTATTTC AGGACAAACC GGGTGTGGTA AAACCACTCA AGTTCCTCAG TTCCTTTATG AAGCTGGTTT TGGTTCAAAG CAATTCAGTT CTCGAAGTGG GATTATAGGG ATTACCCAAC CACGCCGTGT CGCCGTCCTT GCCACTGCCA AGAGAGTGGC ATTTGAGCTT GGTGTTCGTC TTGGTAAAGA AGTCGGGTTT CAAGTTAGGT ACGACAAAAA GATTGGCGAA AACTCCTCTA TCAAGTTTAT GACCGATGGG ATTTTACTTC GTGAGATACA GAATGACTTC TTATTGAGGC GTTACTCTGT GGTAATTCTC GATGAAGCCC ATGAAAGAAG TTTGAACACA GACATTCTAA TTGGGATGCT CACTCGAGTC ATCAAAATCC GACAGGAATA CTACGAGGAA CAACAAACGA GTCTTCAATC TGGAGGCACA GTAACCTCAG AATACCAAAT CACGCCACTT AAACTTATAT TGATGAGTGC GACTTTGCGG GTGGAAGATT TTGTATCAGG GAAAAGGTTA TTCCCTAAGA TACCTCCGCT TATAGAGGTT CCCACTCGAC AGTATCCAGT AACTATACAT TTCTCCAGAA AGACTGAGAT TGTTGATTAT ATCGGTCAAG CTTATAAGAA AGTGATGTCA ATTCACAAAA AGCTACCACA AGGAGGAATA CTTGTTTTTG TGACTGGGCA GAGAGAAGTT GACTATTTAT GTGAGAAGTT ACGTAAGTCT TCAAAGGAAC TTGTTGTTCA AGCTGCTAAA AGAGATGCTT ATGTGAAGAA GAAATGCGAT GATGGTTCAT TTGGTGGTGT TGATATGAAG GAGATTGCTG AAGCATTTGA TGATGGCTCC GACAATCAAA ATTACAGGTT TAGCTCGCAT GGAGAAGATC CTTCTGAAAT TGGTGATGGT AACTATGATG ATGATTTTGA AGAAGAAGAC ATGTATGAGT CTGATGAAGA CAGGGACTGG GAAACTGTTG ATGACGGCTT TGCAAGTTCA TTGGTAGAGG AAGGGAAGCT TGATGCTCTC CGAGCAGCGT TTAATGGTTT GGCAAACGAA AATGGATCCG TATCTGCTGA GCCGACAAAG ACCATTGCAG CAGAGAATCA AGAGGCTGAG CAGGTAAAAA ACACATTTTC TCCAGGAAAA TTACGTGTTC TTCCACTTTA TGCGATGCTA TCTCCAGCTG CACAGCTCCG AGTGTTTGAG GAATTTGAGA AAGAAGAAAG ACTTGTGGTT GTGGCGACTA ATGTAGCGGA AACTTCTCTG ACTATTCCCG GTATAAAGTA TGTGGTTGAT ACAGGTCGGG TTAAAGTGAA GAATTATGAT TCTAAGACTG GTATGGAAAG TTATGAGGTA GATTGGATTA GTCAAGCTTA GGCTAGTCAA CGAGCTGGAA GAGCTGGACG AACTGGACCT GGTCACTGTT ATCGTCTCTA TTCATCTGCG GTTTTTAGCA ATATATTTGA GGAATCTTCG CCTCCTGAAA TCACGAAAGT TCCTGTTGAT GGAGTTGTTC TTCTCATGAA ATCTATGAAC ATTCCAAAGG TTGAGAATTT CCCGTTTCCA ACTCCGCCTG ATCCATCAGC TATTAGAGAA GCAGAACGAT GCTTAAAAGC TTTAGAGGCT CTCGACAGCA ACGGAAGGTT AACACCATTA GGAAAAGCTA TGTCTTACTA TCCCATGAGT CCACGTCACT CAAGAATGCT TCTCACAGTC ATCCAAATGC TAAAAGAGAC CCGGAATTAC TCACGCGCGA ATCTCGTCCT TGGATATGCG GTTGCAGCAG TAGCCGCGTT GAGCTTACCA AACCCTTTGA TAATGGAGTT TGAAGGAGAG AAGAAAAACG AGTCCAAAGA TGCTGACAAA ACCGTCAAGC AAGAAGATAA ACAACGGAGA AAGGATCGGA AAGAGAAGAT CAAAGCTGCT CGGGACAGAT TTTCCAACCC GAGCAGCGAT GCTTTGACTG TAGCTTATGC ATTGCATTCT TTTGAGGTCT CAGAGAATGG CATGGGCTTC TGCGAGGCGA ACGGTTTGCA TTTAAAGACC ATGGACGAGA TGTCTAAGCT CAAAGATCAG CTTTTGAGAC TTGTTTTCAG CTGTTGTAAG CCCTCCGAAA CCGACGACGG TTTCTCATGG ACTCATGGGA CTATACAAGA CGTAGAGAAG TCATGGAGAA TCACCACATC GTCTTCCTCA AAATATCCTC TTCTACAGAA CGAAGAAGAA CTGTTAGGAG AAGCCATATG TGCGGGATGG GCAGACCGTG TAGCCAGAAA GACCAGAGCG ACAGAATACC AAGCTTGTGC GGTTCAAGAA CCTGTTTTCT TGCACCGTTG GTCGTCTCTC ATAAACACAG CTCCGGAGTT ATTGGTCTAC AGCGAGCTCC TACTCACCAA CAGACCATAC ATGCACGGAG CAACTCGAGT AAAGCCGGAA TGGCTGGTGA AGCACGCTAA ATCTCTCTGC GTGTTCTCCT CACCACTCAA GGACCCGAAA CCTTATTACT CGAGTGAGGA GGATAGAGTT TTGTGCTGGG TCATTCCAAG TTTCGGTCCT CATAATTGGG AGCTTCCGGC TCACAGTGTG GCAATAACCG ATGATAGAGA CCGAGCAGCA GCTTTCGGAT GTGCTTTGCT TCAAGGAGAG GTATTACCTT GTTTGAAAAG CGTTAGGACG TTGTTGGCTG GGAAACCTGA AACATTGTTG GAAAGAGAAG CTTGGGGTTT AGAAAGAGTT GGGGGTTTGG TGATGGTTTT GACAGAGAAG AAGATTGATA GTTTAGAGAG TTTGAGAAAG AGTTGGGAGC AGAATCCGAA TGTGCTTTAC TCTGAGACTG AAGTTTGGTT TCAGAAAAAG TTTCGTCATC GTGTCAAAGA GCTTTGGCAA ACAATGCTAA AGGAGGCTAA CGTTCAAAGA AGTCAGAGGA GGAGATAAGT GTCTTCAAAA TTATTTTTAA TTACGAAGGA AATTTTGTTA GAAACTTAAA TGTGTAACAG AGAAA |
| Length | 3805 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2840573.. 2845084 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G33390.1 |
| Description | RNA helicase family protein |
| TAIR curator summary | Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain). |
| Alias | [ATFAS4][FAS4][FASCIATED STEM 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.1774 |
Ahg926503 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 51.3809 |
Ahg489290 | ABL interactor-like protein 3 |
| 53.2447 |
Ahg489346 | tRNA (guanine-N-7) methyltransferase |
| 63.1664 |
Ahg486216 | nuclear RNA polymerase A1 |
| 63.1902 |
Ahg472383 | Exostosin family protein |
| 69.5342 |
Ahg481031 | Sec23/Sec24 protein transport family protein |
| 70.2496 |
Ahg481564 | DNAJ heat shock N-terminal domain-containing protein |
| 80.9444 |
Ahg919001 | |
| 81.7313 |
Ahg479641 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 82.7526 |
Ahg929709 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|