Detail



ID : Ahg473571

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473571|fgenesh2_kg.1__3525__AT1G34180.1
Sequence
TTTCTTCCAT TGTTATGTAC GTTTGATCTC GTTGTCTCCA CTGAAAGAGA CGAAGAGAGA AAGAAGGTTT TAGGTTGTGT TCTGTTTTTA AGGGTTTACT TCTCGTTGAC CCGATCGATT GTTACGGAGA TGGTTGATTC TTCTCCTGAT TCGTGTTTCA AAGCTGGTAA GTTTAGCGCT CCAGGTTTTC GATTTCACCC GACTGATGAA GAGCTTGTGG TTTATTATCT TAAGAGGAAG ATCTGTTGTA GAAAACTTAG AGTCAACGCC ATTGGTGTCG TTGATGTCTA CAAAGTCGAT CCTTCTGAAT TGCCTGGTCT ATCGATGTTG AAGACGGGAG ATCGACAGTG GTTCTTTTTC ACTCCAAGGA ATAGGAAGTA TCCAAACGCA GCTAGGTCAA GCAGAGGTAC TGCTACTGGG TATTGGAAGG CAACGGGAAA GGATCGAGTC ATTGAGTACA ATTCCAGATC GGTTGGACTC AAGAAGACTC TTGTTTTCTA TAGAGGTCGG GCTCCTAATG GTGAGCGAAC TGACTGGGTG ATGCACGAGT ACACGATGGA TGAAGAAGAG CTCGGGAGAT GTAAGAACGC CAAGGAGTAT TATGCTCTTT ATAAGCTGTA CAAGAAAAGT GGGGCTGGTC CCAAAAATGG TGAACAGTAT GGTGCTCCGT TTCAAGAAGA AGAATGGGTT GATAGTGATA GTGAAGATGC AGATAATGTT GCTGTACCGG ATTATCCTGT GGTTCGTTAT GAGAACAGTC GTCGTGCGGA TAATATTAAA TTTTCCAATC CTGTCAATCT TCAGTTAGAG GATATCGAGA AGCTTCTCAA TGAAGTCCCA GATGCACCCG GGGTTAACTC AAGACAATTC AATGAGTTTG TTGGTGCTCC GCAGGGTAAT AGCGCAGAAG TGATAGAAAG CACATTGCTG AATAATTCTT CTGGAGAGTT TCTTGACCCC CGGAAAATTG GAGTGTTCTT GCCAAATGGC CAGCCATACA ACAGGCACTC GAGTTTTCAG TCCCAACTGA AGTCAGCAAA CTCATTTGAG GCTACCTCTG GTATGGCACC TCTTCTAGAT TTTGAGAAGG AGGAGGACTA CATTGAAATG GATGATCTTC TGATCCCTGA ACTCGGAGCT TCTCTAACTG AGAAATCCAC AGAGTTCTTG AGACACGGTG AATTTGGTGA TGTTAATGAA TATGACCAAT TGTTCCATGA CATTCTCGTG TCTTTGGATG ACCCTGTTTT TCAGGGAACT TCTACAAATC TGTCTTCTCT GAGTAATTTT ACTAATAACA CATCAGACCA GAGACAGCAA TACCTTAATC AACAGTTTCA GTACCAGGCC CCTGAGAACC AGCTGAATAA CTTCATGTAT CCTAGTACCA CTATTAATCA GTTCACTGAC AATATGTGGT TTAAAGATGA TCAGGCTGCT CTCTTTGTTC AACCACAATC TTCTTCTGGA GCATTCGCTT CACAGTCAAC AGGTGTGATG CCTGAGTCTA TGAATCCCAC TATGAGTGTA AATCCCCAAG ACAAGGAAGG CCAAAATGGT GGTGGAACAA GGAGCCAGTT CTCATCAGCT CTGTGGGAAT TATTGGAATC AATACCATCA ACACCAGCCT CTGCCTGTGA GGGTCCTCTT AACCAGACCT TTGTGCGTAT GTCTAGCTTC AGCCGGATCA GGTTCAATGG AACGTCAGTG GCTAGTAGAA AAGTCACTTT AGCAAAGAAG CGTATCAGTA ACAGAGGTTT TCTTCTGTTA TCAATTATGG GTGCTTTGTG TGCCATCTTC TGGGTGTTCA TAGCCACAGT TGGAGTTTTG GGAAGACCTG TCTTGTCGTG ACCTAGACTC TTGTTTCAGG ATAAATTAGA AGAAAGCATG ATCCTCATCT TTGGTTATGT ATAGAGTTTA ATTCTTAACA AATGGCTTTT TTTTTTCTTC TGGATTCTCT GATGTTATCA TATTAAGCAG CATT 
Length1984
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15172672.. 15175372
Download Sequence
A.thaliana
AGI-codeAT1G34180.2
DescriptionNAC domain containing protein 16
TAIR curator summary
Alias[anac016][NAC016][NAC domain containing protein 16]
Gene coexpression
MR
MR Locus Description
23.0434 Ahg488679
24.1868 Ahg941387 Protein kinase superfamily protein
36.2215 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
36.428 Ahg932692
36.5103 Ahg492070 Calcium-binding EF-hand family protein
37.5899 Ahg322706 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
37.6829 Ahg478682 multidrug resistance-associated protein 3
40.9145 Ahg493362 UDP-Glycosyltransferase superfamily protein
41.833 Ahg950146 Translation initiation factor SUI1 family protein
43.6807 Ahg479059 lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression