Detail



ID : Ahg473619

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473619|fgenesh2_kg.1__3573__AT1G31600.2
Sequence
GATACCTCGC CGTTATACAA TCGGAGAAAG TTACAATCTC TTATTCCGAG AATGGTTCAG CCGCGATTCG TCCGTCCGAC GCAATCATCC CCTTCCTCCA ATTCCGGAGA ATCAAATTCA TCCAATCTAT ACGTCGCCAA TTGTGGACCG GCGGTTGGAC TATCACACGA CGCAATCGCG GCGGTGTTCG CTGCATACGG TAAAGTAAAC GGCGTCTACG CGGCTGACGA TAGCGGCGTT CGTATTATTA TCTCTTTCGC AGATCCTTGT TCGGCGAAAT CAGCTTTAGA AGCTTTGAAT GGTCGACCAT GTCCTGACCT TAAAGGACGG TCTTTGCATA TTCGATATTC AGTTCTTCAA TTACCTTCCG AGGTGAATGA TTGTGTTCCA GTGTCTTTGG TTGATTCAGA GTTGAATATC CCAGGGCTTT TCTTGTTACC TGATTTTGTT AGTGTGGAAG AAGAACAGCA ATTGCTTGCA GCTGTTGATG CTCGGCCTTG GATTGGTCTT GCTAAACGGC GTGTTCAACA CTATGGATAT GAGTTTTGTT ACGGGACAAG AAATGTTGAT ACCAAGAAGC GTCTTGGCGA GCTTCCGTCG TTTGTTTCTC CTATACTTGA AAGAATGTCG TTGTTCCCGA ACTTCGACAT TAACTCAGCA AGCTTGGATT TGGACCAGTT AACGGTAAAT GAATACCCAT CTGGTGTGGG TTTATCGCCT CACATTGACA CACATTCAGC ATTTGAAGAT TGCATCTTCA GCCTTTCTTT AGCTGGTCCT TGTATTATGG AATTCAGAAG ATACTCTGTT TCCACATGGA AAGCCTCATC TGCCGATGCT GAGAAGTCGG GTGACTCCTC TTGCATCAGA AAGGCCTTAT ATCTTCCTCC TCGGTCCATG CTCTTATTAT CCGGTGAAGC ACGCTATGCT TGGAATCACT ACATTCCACA TCACAAGATT GGCAAGGTGA AGGAGAAAGT GATCAGAAGA AGTTCCAGAA GGGTATCTTT CACATTACGG AAGGTGAGAA ATCTTCCTTG CAAGTGTAAG TATCCACAAT ACTGTGACTC TCAGCAACAA ATGTAACTGA AGAAGAGGAG AAAAATGAAA TAAAGAATAT TTTAGGTAGA GACAAAATGC ATATGGAGAA GAAAAAGAAG AACCATTTTT GTAGCTGTTT ACTCTTAATT ATTAAACTAG ATTTTGATGA TAAACATTGT TACATTTGCA TTGCAACATA GAAAGAAAGA TCATCG 
Length1256
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15802020.. 15805230
Download Sequence
A.thaliana
AGI-codeAT1G31600.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[AtTRM9][TRM9][Arabidopsis thaliana tRNA methyltransferase 9][tRNA methyltransferase 9]
Gene coexpression
MR
MR Locus Description
27.4955 Ahg346068
34.9714 Ahg344726
40.1871 Ahg933473 F-box/RNI-like superfamily protein
47.833 Ahg338140 MIF4G domain-containing protein
56.7803 Ahg903623
56.8683 Ahg934176
57.2364 Ahg933171 RNA-binding CRS1 / YhbY (CRM) domain protein
63.3088 Ahg474732
85.9767 Ahg917601 phosphatidylinositol-speciwc phospholipase C5
88.7694 Ahg348153 methyl esterase 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression