Detail



ID : Ahg473889

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473889|fgenesh2_kg.1__3843__AT1G47420.1
Sequence
TCACAAAAAT GGGAACCCTA GGACGAGCGA TTCACTCTCT CGGTAACCGG ATTCGTGCAA CTGCCCAATC TCTTGATCGC GTTGGTTCTC TTCTTCAAGG AAGCCACCAC ATCGAGGAAC ATCTGTCGAG GCATCGGTCG TTGATGACTG TGGTTGATAA ATCTCCATTG GTGACTCCGA GTGCTTCTGT TACGATCGGG AAAGGCTCGG CAATTTCGTA TGGATGTGCT CGTCGAGATT TGCAGTATTC TCGTGCAATT GGTGTTGGAC AAGTGCGGCG ATTTAGCGAA GATGTTTCTC ACATGCCTGA AATGAAGGAC TCTGATGTTC TGAATGCATT CAAAGACTTG ATGGCTGCAG ATTGGGCTGA GCTTCCTTCT GCTGTTGTTC GCAATGCCAA GAGCGCGATA TCGAAAAACA CAGATGACAA GGCGGGGCAA GAGGCCTTGA AAAACGTGTT CCGAGCAGCT GAAGCTGTTG AGGAATTTGG TGGGATTCTT ACTTCGATTA AGATGGAAAT CGATGATAGC ATTGGAATGA GTGGGGAGGG TGTGAAGCCT TTACCAAATG ATATAACCGA TGCGCTGCGT ACTGCTTATC AGAGGTATGC TGACTACCTA GATTCCTTTG AACCTGAAGA AGTTTACTTG AAGAAGAAGG TTGAGATGGA GTTGGGGACA AAGATGATCC ACTTGAAGAT GAGATGCAGC GGGCTTGGTT CTGAATGGGG AAAGGTTACT GTTCTTGGAA CCTCAGGACT CTCGGGATCT TACGTGGAGC AGAGGGCATA AAACGGAAAG AGAAGATCTT AAAGACGTGC AAAACTTGTT ATGTTGTTAT TGCGTTATTG TGTCTTAACA CATAATAAAG GTCAATCTGA CCAAAAGACA TTATAAGGTG AGTTTGTTCA TTGTTTCCTC CAAACGAAGC TTTCAAATTT AGAGCTTAAC ACCAGTTGAA AAATAAACTC ACAGCTCCAA TTTGTGTTCA TTTGTTACTG TTTCCTTACA TGAGAGATCT TTTGTTTCTA ATGATTCAAC ATTTTGAGCT 
Length1050
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22670918.. 22672663
Download Sequence
A.thaliana
AGI-codeAT1G47420.1
Descriptionsuccinate dehydrogenase 5
TAIR curator summary
Alias[SDH5][succinate dehydrogenase 5]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg494129 Rad23 UV excision repair protein family
5.47723 Ahg933697
6.32456 Ahg474279 ATP synthase epsilon chain, mitochondrial
6.48074 Ahg486781 NADH-ubiquinone oxidoreductase-related
13.2665 Ahg483663 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
13.784 Ahg358942 3-dehydroquinate synthase, putative
19.6723 Ahg319057 Plastid-lipid associated protein PAP / fibrillin family protein
20.8327 Ahg943858 vacuolar-type H(+)-ATPase C3
21.9317 Ahg480951 synaptotagmin A
22.8473 Ahg316186 Sec14p-like phosphatidylinositol transfer family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression