Detail



ID : Ahg473901

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473901|fgenesh2_kg.1__3855__AT1G47570.2
Sequence
TCAAATTGGT AACGTACGGT CATTTGACAT ATTCCGGTGA GTGCAGACTG TTACACAAAT CAAACCTTTC TTTAAAAAAT TAAAAATGGA GAGATTCTTC AACAGAGAGA AACCCTAGAC CAATAGAGGA ATCGTGCTTA CCACTCTCTT TCTCGAATCA TCTTCTTCTT CGCGACGAGA CTTTCTTAGT TTCTGTTGAA ATCTCTTATT TTCGAGTATC TACTTTGAAA TTTGATTCCA GAAGTCCGAT GACGACGGCG GAAACTGGAC AATCCTCTGG TTCTAAAACC TCTGATGATG CATGGGCTAA ACTGTCAGTA TTGTTTCCTT TTCCTCTGGA CACTAGATTC TCAGACATTG AGATTAAGTG CAATGATATG GTAATATGCT CTGAGATTAA ACCGTCTTCC GTAGAGAGAC ATGAATGGTG CAGAATAACT AAGAATTTGG GTCAAGGTTC TGCTACTATA CATAATAAGA GTTCGGATGT TATACTTGTT GATGAGGCTG TCATCCCGAT AGATGGTGCT GTCGATATCA TTAGTGGATC TGAAATTGTT CCTGGCCCTG AAGGACAAGG TTACTTGCAG TACAGATTTA CAATAATGCC AGCTCCAGAA TCCAGAACTC AGCTATTACA GATTTTAATA GACCCCGAAC ATGCAAAATG CAGTATCTGC TTAAACATAT GGCACGATGT TGTCACAGCT GCACCTTGCC TTCATAATTT CTGTAATGGC TGTTTTTCAG AATGGATGCG GAGATCGGAG GAAAAACATA AACATGTGTT ATGTCCACAG TGCAGAACAA CAGTACAATA TGTGGGGAAA AATCATTTTC TAAAAAACAT ACAAGAGGAT ATATTAAAAG TGGATGCTGC ACTGAGACGA CCAGCTGAAG ATATTGCAGT GTTGGACTCA TCTGCATCGA TACAATCAAA TCTTATCATT GGGAGCAAGA GAAAACGTCG TTTGAATATG CCCTCGCCCA CACTTGAAGA AAGAGATAAC TTGCGTTTGC AATGCCCACA ATGTGTTGCT AATATTGGGA GCTATCGGTG TGAACATCAT GGTGCGCATC TGCAATGTCA CCTGTGTCAA GGAATGATGC CCTTTAGAGC CAATCTCCAA GTGCCGTTAC ACTGCAAGGG ATGTGATAGG CCGTTTTGCG GTGCTTACTG GAGTTCCGAG AATGTTACAC AAGGTGTATC TAGTCCAGTC TGCGGTCGCG AAACTTTCAG ACCTATCTCG GAACGCACAA TTACAAGGAT TCCATTCATA ACCCATGAAA TGAATCGCCA TGAACAAGAT ATAACGCAAA GATGCATTAC CCATATGGGG AAAACTGTGC CGGATGTTGT AGCAGAGTGG CTCAGGCTTT TCAACAATAG AGAAATCGAC CGCTCGAGAA TGCCTCTCAA TCATGCTGAG ATGATAACTG CATCAACACA TGTTTGCAAT GATTGTTATG ATAAGCTGGT GGGGTTCCTT TTATACTGGT TCCGGATAAC ACTGCCGAGA GATCATTTGC CAGCGGATGT AGGAGCGAGA GAAGATTGTT GGTATGGATA CGCATGTAGG ACACAACACC ACAACGAAGA ACATGCTCGT AAACGTAACC ATGTATGTCG TCCTACCAGA GGGAACCATC ACTTTTAGTC CGCATTTCGT CTTTCCTCGA CAAGCTTTTG ATTGTATTTT GGGATAATCT CTGTATGAGT ACTAGAAACT GTTCTATAGA AGATGATGTC GGGTCAA 
Length1757
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22798447.. 22803531
Download Sequence
A.thaliana
AGI-codeAT1G47570.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg474346 protein kinase family protein / C-type lectin domain-containing protein
10.247 Ahg941924
12.7279 Ahg927794 heat shock transcription factor A1E
13.3417 Ahg475241 U2 snRNP auxilliary factor, large subunit, splicing factor
18.4391 Ahg486241 Tubulin binding cofactor C domain-containing protein
36.6606 Ahg478519 Ras-related small GTP-binding family protein
38.1051 Ahg483562
40.7308 Ahg940676 alpha/beta-Hydrolases superfamily protein
41.2432 Ahg477234 Mov34/MPN/PAD-1 family protein
42.0476 Ahg905423 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression