Detail



ID : Ahg473940

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473940|fgenesh2_kg.1__3894__AT1G48040.1
Sequence
TCTTCTTTAT TCTTTTAGGC GAATTTCAAT TGCGTCCAAG CAAAGCACCT CCACGGCTCC ACCCCCAAAT TTTCGTGGAT TTATTCTTCG ATTTACCTTT CGGTGAAATT CGCAATTGGA TCTGCTCCAT TTGATTATAA ACAAAGTCAT GATTTTGAGT CAAACAATGG TTGCTGAGGC TGAGATCAGG GTTCTTGACG TTAAGTGCCA TATCTCCGCT GCTAAAGATC AGAAGAATTT TCAGATCGGC GAAGTTCGTG TTTCTGAGTC TGTTCGTGCT GAGATTTCGG GTTCCGCTGA AACGCCTCGA TTCGGATCGG GCATGAGCTG TGTAACTACT ACCATTGGAG AATCAACCAG TGAGTTTATT CCAACTATAC GTTCAGGGAG CTTTGCTGAC ATTCGAAGCC GAGAAACCAT GGAGGATGAA CACATTTGCA TAGATGACTT GTCAGCTCAT CTTGGGTCCT TTAACTTCTC GGTACCAAGT GCTTTTTATG GCGTGTTTGA TGGACATGGT GGACCTGAGG CAGCAATTTT CATGAAGGAA AACTTGACTA GATTGTTTTT TCAAGATGCT GTATTTCCAG AGATGCCCTC CATTGTGGAT GCGTTTTTCT TAGAAGAACT GGAGAATTCT CACCGAAAGG CTTTTGCTTT GGCTGATCTT GCCATGGCTG ATGAAAGCAT TGTCAGTGGT TCATGCGGGA CAACCGCGTT GACCGCTCTG ATAATTGGAC GACATCTTCT GGTTGCTAAT GCTGGAGATT GCCGTGCAGT GCTATGCCGG AGAGGAGTGG CTGTTGATAT GTCTTTCGAT CACAGATCAA CATATGAGCC AGAACGAAGG CGGATTGAAG ATTTAGGAGG ATACTTTGAG GACGGATATC TCAACGGGGT CCTTGCTGTA ACCCGTGCCA TTGGGGATTG GGAACTGAAG AATCCTTTCA CTGACTCCTC TTCACCACTG ATTTCTGACC CAGAGATTCG ACAGATCATT CTAACAGAGG ACGACGAGTT CTTGATTTTG GCATGTGATG GTATATGGGA TGTGTTGTCA AGCCAGAATG CAGTGAGTAA TGTAAGGCAA GGTTTAAGGA GGCATGGTGA CCCGAGACAA TGTGCGATGG AACTTGGAAA AGAAGCAGCT AGGCTTAACT CATCAGATAA TATGACGGTT GTAGTCATCT GCTTCTCCTC AGTCCCGTCT TCACCTAAAC AACTGCAGAG GAGAAGATTA AGATTCTGTG TTTCCGATGA AGGCCGAGCT CGGTTACAAG CAATGCTTGG AGGCGAGTGA AAGCAGTTTT TTTGGCGGTA TATACAAACA ACAGGGATCG GGTGCTACCG ATCAAACGAT TATTTCTCTA ATTTGAGATT CCATTGGATG ATGAGATAAA ATAAGAGACT TAGAGAGAGT GGTAGAGATT TAAGGTCATG TTTGTAATGT GGTTACTCAG TTTTGATTCA TCTGTTTTTT TGGTTGTTTC AGAGAGAGAG AGCTAGAGAG AAAAAGCAGC CTGAAGTTTT GGTAGGATTA TTGAAACTGA TAATGAGGAT TTCATTTTTG TTCTCGAGGA TTAGTTATGT TGTACCCATT ATTGATTGGT TTAAGGATTT TTAATTT 
Length1627
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23271483.. 23273609
Download Sequence
A.thaliana
AGI-codeAT1G48040.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.6382 Ahg495818 Ypt/Rab-GAP domain of gyp1p superfamily protein
19.8242 Ahg493888 WD-40 repeat family protein / zfwd3 protein (ZFWD3)
20.347 Ahg318218 pectinesterase family protein
22.4499 Ahg324904 myb domain protein 3r-5
32.4962 Ahg471527 Phosphatidylinositol 3- and 4-kinase family protein
39.6863 Ahg472439 membrane-anchored ubiquitin-fold protein 6 precursor
44.833 Ahg908250 Mannose-6-phosphate isomerase, type I
52.5262 Ahg326545 P-loop containing nucleoside triphosphate hydrolases superfamily protein
55.3173 Ahg917311 Transducin/WD40 repeat-like superfamily protein
58.4123 Ahg940129 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression