| Annotation |
|---|
| Description | jgi|Araly1|473964|fgenesh2_kg.1__3918__AT1G48280.1 |
| Sequence |
CAGCTTCGAA GTCGTCTCTT GGATTTTTAC GAGTCAAAAC TGAGTAAGAC TTTAGCGACG AGTCGTCTCG CCGGTGACCG CCGTATACGG CGGAGATTTT GTTAGTTATG TCCCGCATTT CCACCGCCTC CACTACTCCT TCTCGTGTTA GAGCTGCGAA TTCGCACTAT TCAGTGATCT CTAAACCTAG AGCCCAAGAC GATAACGGTC TCACCGGAGG TAAACCGAAA TCGTCCGGTC ACGATGTGAA GAATGATCCG GCTAAGAACC GGCGATCAAT TCTGCTTAAA AGAGCGAAAT CCGGAGAGGA GGAGACGGCG GTTTTGGCTC CTCAGAGAGC TCGGTCTGTG AATCGTCCGG CGGTCGTAGA GCAATTCGGT TGTCCGAGGC GGCCAATTTC TAGGAAAACT GAAGAGTCAG TAATGGCTAC GGCGGTGGTG GCGGAGGATG AGAAGAGGAA GAGAATGAAG GAATTGGAGG AGAAGCTAGT AGTGAATGAG TCGTTGATTG AGGATTTGCA GTTGCAGGTT TTGCATTTGA AAACGGAGTT AGAGGAAGCT CGTAATTCAA ATGCAGAGCT TGAGTTGAAG AACAAGAAGC TTTCTCAGGA TCTTGCTTCA GCTGAAGCTA AGATCTCATC ACTTTCCTCT AACGACAAGC CAGCTAAAGA ACATCAGAAC ACCAGATTCA AAGATATCCA GAGGTTAATA GCTAGCAAAT TAGAGCAATC CAAGGTTAAA AAGGAGGTAG CAGTAGAGTC ATCAAGCTCC ATTAAAACAA GATCATCTCC ACAACCACCA GCACCTTCAC CTTCAAGATT ACAGCCAACA CCGCCATTGC CGAAGTTTTT GGTGTCTCCA GCTAGCAGTT TAGGTAAAAG AGATGAAAGT TCTTCACCCT TTGCACCACC AACACCACCG CCTCCACCAC CACCACCACC ACCTAGGCCT CTTGCTAAAG CAGCTCGTGC GCAGAAGTCT CCTCCAGTTT CGCAGTTATT TCAGTTGTTG AAGAAGCAAG ATAATAGTAG AGACCTTTCT CAGTCTGTTA ATGGGAATCA ATCTCAAGTT AACAGTGCTC ACAACAGTAT AGTCGGAGAA ATTCAAAACC GTTCTGCGCA CCTCATCGCT ATAAAAGCTG ATATAGAGAC AAAGGGGGAT TTTATCAATG ATCTTATCCA GAAAGTTCTG ACCACTTGTT TTTCGGATAT GGAAGATGTC ATGAAATTTG TGGATTGGCT TGATAAAGAA CTAGCAACTC TGGCTGATGA GCGAGCTGTG CTTAAGCATT TCAAGTGGCC TGAGAAGAAA GCCGATGCCT TGCAAGAGGC TGCAGTTGAA TACCGCGAGC TAAAGAAACT GGAAAAAGAA CTATCTTCGT ACTCTGATGA TCCGAGCATT CACTACGGTG TTGCCCTGAA GAAAATGGCC AACTTACTAG ACAAGTCGGA GCAGAGGATA AGGAGGCTAG TCAGATTACG TGGCTCATCC ATGCGTTCTT ACCAAGACTT TAAGATCCCA GTCGAGTGGA TGCTTGACTC GGGAATGATA AGCAAGATCA AAAGAGCATC GATCAAGCTT GCTAGAACTT ACATGAATAG AGTAGCGAAT GAGCTACAAT CAGCTCGTAA CTTGGATAGA GAGTCTACTC AAGAAGCATT GCTTCTTCAA GGCGTCCGAT TTGCTTACAG AACGCATCAG TTTGCGGGAG GGCTCGATCC AGAGACATTG TGTGCATTAG AAGAGATTAA GCAACGTGTT CCGAGTCATC TCCGGCTGGC ACGGGGGAAT ATGGCCGGAA CTCCGTCGTA GAAAAGTAAT CAGAGAAATG TGAGGCATAT GGCCTTTGGT TTTGGCTATA AATTCGTTAT TTGTGTTAAT AGTGTTTGGT TGAGTCAGTA AATGTTGTGG CCCACGTAAT AATAATGTTA AAGTGAATCT AAAATGTTCC TCCAATGAAT TACTCAATTA AATTTTG |
| Length | 1977 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 23406210.. 23408940 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G48280.1 |
| Description | hydroxyproline-rich glycoprotein family protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.16441 |
Ahg489315 | Transducin/WD40 repeat-like superfamily protein |
| 15.8114 |
Ahg496218 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| 16.5831 |
Ahg473822 | Peptidase M20/M25/M40 family protein |
| 16.9706 |
Ahg947595 | |
| 28.3549 |
Ahg480455 | AAA-type ATPase family protein |
| 28.8617 |
Ahg938693 | Glycosyl transferase family 4 protein |
| 32.9393 |
Ahg481989 | Thioesterase/thiol ester dehydrase-isomerase superfamily protein |
| 34.4093 |
Ahg494672 | COP1-interacting protein-related |
| 49.5681 |
Ahg487228 | cyclin-dependent protein kinase inhibitors |
| 56.4801 |
Ahg940390 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|