Detail



ID : Ahg474007

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474007|fgenesh2_kg.1__3961__AT1G48660.1
Sequence
ATGAGTTTAA GCGTTGAGCT CAAGGATCTG GAGGTGTTAA CAACGAATGC GAAGCAAATA CAAGACGACG TATTGAAGGA AATACTAACA CTCAACGCCA ACACAGAGTA TGTCCAACGC TTTCTCCATG GAAGCTCTGA TAAAGAGTTG TTCAAGAAGA ATGTACCAGT GGTGAGCTAC GGTGATGTCA AGCCTTATAT CGAGCGTGTT GCGAATGGAG AGCCCTCGGA TGTGATTTCG GGTGAACCCA TTACGAGATT CGTCCAAAGC TCGGGAACCT CAGGAGGGAT ACATAAAATA TTTCCAGTGA ACGATAAGTA CATAGAGAAG CTGGGATACC TTGTGGATGT ATCCTCTTTC ATTACTTCCA AGCATTTCAA TGACAACGTA GCTGAGAAAG GAAAGAAAAT GGCGTTTCTT TACAACAGAT TAGAATCCAA AACTCCCTCC GGATTACCCG TTTCTTCATC ATTTTCAAGC TATTTCATGA GCGATTACTT CAAAAACCGA CCATCAAAAT GTAATTCTGA GTACACAAGC CCCGACCAAG TTATATTTTG CCCCGACAAC AACCAAAGTA TGTATTGTCA TCTTCTATGC GGGCTGTCCC AGAGAGAAAA GGTTGTGGGA GTTAGTGCAA CATTTGCTCA TGCCTTGGTC AAAGCACTCA ATGCTCTTCA AATTTACTGG AAGGAATTGT CTAGTAATAT CCGATCAGGT CATGTTAGTG AGTGGATCAC TGACACTAAC TGTAGAAACT CTGTCTCGGC CACTCTTGGA GGACCGGATC TTGAATTGGC CGATATGATT GAACGAGAAT GCAGCAACAA CTCGTGGGAA GGTATCATCA CACGACTTTG GCCCAAAGCA AAATTTATTG AATGCATTGT TACAGGACAA ATGGCTCAAT ACATTCCAAC ATTGGAGTTT TATTCCAACA AGCTTCCTAT AGTTTCCATG ATATATGGGT CTTCTGAAAG TATATTTGGG GTGAATGTGG ATCCTTTATC CAAACCACAA GATGTGTCCT ACACATTTCT GCCTAATATC TCCTACTTTG AGTTTCTACC TGTTGATCAC GAGGAAGATA TGAACAACAT TGTTGATCTT GTCAACGTCA AGCTCGGGTG CTATTATGAA ACCGTGGTTA CCAGTTATTT TGGTCTACAC AGATATCTTG TTGGAGATAT TCTACAGGTG ACTGGATTTT ACAATAAGAC ACCTCAATTT AGATTTGTAC GCAGAAAGAA TACTGTTTTA AGCGTCAATA GTGAAGCAAC AACTGAAGAG GACATTTTAA GAGGGTTGGC TCGTGCGACC CTTGTTCTTG AATCTTCAGA TTTAATGTTG ATGGGCTTCA CATGCTGTGC ATATATCTCC ACTTTTCCAG GTCACTACGT TTTTTACTGG GAACTCAAAG CAAAAGATGT TAACGATGTT GTTGAACTTG ATGAAAAAGT GTTGGCAGAA TGTTGCAATG CGTTAGAGGA ATCGTTTGGT TCTCTTTATA AGAGACTAAG GAGTAAGGAT GGGTCAGTTG GAGCTCTAGA GATAAGGGTG GTGCAACAAG GAACATTTGA TTCTCTCATG GAATATTTCG TCTCCCAAGG TTGTTCGAGT GCTCAGTACA AAACACCTAT TTGCATCAAC TCTTCTGAAG CCTTGGCAGT TCTTGAAGAT AAGGTTCTTG CTCGATTCTA CAGCGAAAAA TCTCCTCCTC TTGACTTATA A 
Length1731
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23671335.. 23680237
Download Sequence
A.thaliana
AGI-codeAT1G48660.1
DescriptionAuxin-responsive GH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
39.3319 Virus3318
48.7442 Virus3538
52.2685 Ahg890708 SCR-like 11
57.4456 Virus1587
63.6396 Virus1976
64.3817 Ahg487283 Plant invertase/pectin methylesterase inhibitor superfamily
64.4981 Ahg497328 exocyst subunit exo70 family protein H8
70.0999 Ahg933327
73.1369 Ahg480960 Disease resistance-responsive (dirigent-like protein) family protein
81.8046 Ahg949086
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression