Detail



ID : Ahg474280

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474280|fgenesh2_kg.1__4234__AT1G51660.1
Sequence
TCAGTGTCCT TTCAATTTCT TTCGACGAAC CTTCATTTCT CAATTTTGAT CGCTTCGAAG AACGAATCAA TATAAGCCTG CCACAAACCC TAGAATACGA CAACGCACGA CGACGAAGTC GAAGAAGACG ACTACTATAA AACGACGAAG ATAAATAACT TCAATCTCCA ATCGAGAGCG ATGAGACCGA TTCAATCGCC TCCAGGAGTT TCCGTTCCGG TGAAAAGCCG TCCTCGTCGC CGTCCTGATC TTACCTTACC GCTTCCTCAA CGCGATGTTT CTCTCGCTGT ACCTCTCCCT CTCCCACCTA CTTCCGGTGG ATCTGCGCCG TCTTCTGGTG GTTCAGCGTC TTCAGCTCCG TCGACGAACA CTAACAGCTC CTCAGAATCG AAGAACTATT CGGATTTAGT GAGAGGTAAC CGGATCGGAA GCGGAGCTGG TGGAACGGTT TACAAAGTGG TTCACCGTCC GAGTTCTCGT CTATACGCAC TCAAGGTGAT ATACGGTAAC CACGAGGAGA CAGTGAGACG TCAGATCTGT AGAGAGATCG AGATTTTGCG AGATGTGAAT CATCCAAACG TTGTGAAATG TCACGAGATG TTTGATCAGA ACGGTGAGAT CCAGGTTTTG CTTGAGTTTA TGGATAAAGG TTCTTTAGAA GGTGCTCATG TGTGGAAAGA GCAACAATTA GCTGATCTAT CTCGTCAGAT TCTTAGTGGT TTAGCTTATC TCCATAGCCG TCACATAGTT CATCGTGATA TCAAACCATC GAATCTTTTG ATAAACTCTG CTAAAAACGT TAAGATTGCA GATTTTGGAG TGAGTAGGAT CTTGGCTCAG ACTATGGATC CGTGTAATTC ATCTGTTGGA ACCATTGCTT ATATGAGTCC TGAGAGGATT AACACTGATT TGAATCAGGG TTTGTATGAT GGTTATGCTG GTGATATTTG GAGCTTAGGT GTTAGCATTT TGGAGTTTTA CTTGGGGAGG TTTCCTTTCC CTGTGAGTAG ACAAGGTGAT TGGGCAAGTC TTATGTGTGC CATCTGTATG TCTCAGCCTC CGGAAGCTCC ACCTACCGCG TCGCCGGAGT TCCGGCATTT TATCTCGTGT TGCTTGCAGA GAGAACCGGG GAAAAGGAGA AGTGCGATGC AGCTATTGCA GCATCCTTTC ATATTAAGAG CAAGTCCGAA CCAGAACAGG TCTCCTCAGA ATCTACATCA ACTCTTGCCT CCTCCTCGTC CTCTGTCCTC GTCTTCTTCT CCAACCACAT AGCGTTTTCT CTCCTCTCCC CTTCATCAAC TTACATTTTT TCCTGTTACT GTTCTTGTTG AGTCTTTGTC CAATTTTTGC GCTAATCAAG GAGGGTCTCT GAATCTTACA TTAATTAAGG AGTAAAAAAC TCGAGAAAGG GTTTATTGGG ATTATTGTTT TCTAGAAAGA TAAAGAGAAC AATAAATTCT TATGCTTATG ATGGTGCATG TATCCCCAAT GTAGCTTTCT TGAATTTTTC ATAAAAGTTT TTGCCTT 
Length1527
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25953099.. 25954700
Download Sequence
A.thaliana
AGI-codeAT1G51660.1
Descriptionmitogen-activated protein kinase kinase 4
TAIR curator summaryEncodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.
Alias[ATMEK4][ATMKK4][MKK4][ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4][mitogen-activated protein kinase kinase 4]
Gene coexpression
MR
MR Locus Description
18.1659 Ahg315987 SPFH/Band 7/PHB domain-containing membrane-associated protein family
18.2483 Ahg483871 ATP binding cassette subfamily B4
20.567 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
21.166 Ahg938735 calcium-dependent protein kinase 32
22.8473 Ahg480771
23.6643 Ahg478682 multidrug resistance-associated protein 3
28.4253 Ahg487270
28.5482 Ahg938307 Major facilitator superfamily protein
30.9839 Ahg470787 pol-like 5
44.4972 Ahg942355 carbon/nitrogen insensitive 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression