Detail



ID : Ahg474409

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474409|fgenesh2_kg.1__4363__AT1G52830.1
Sequence
AACAATAGAA GTGCTTGAGA GGAGAAAAGT AACAAAACTT CATATAGCCA AAGGCAAACA AAAAAAAAGA AGAGAAAGAA ATAAATGGCA AAGGAAGGTC TAGGACTTGA GATCACAGAG CTTCGATTGG GTCTTCCAGG AGATAATTAT AGCGAAATCT CAATTTGGGG ATCGAAGAAT AAGAAGAGGG TGCTCTCGGA TATGATGACA TCGTCATCGT TAAATACTGA GAATGAAAAC GGCGTCGTTT CATCGGCTGA GGATGAATCT TTACCGGTGG TGAAGAGTCA GGCGGTGGGG TGGCCACCTG TGTGTTCTTA TAGGAGACAG AAGAACAATG AGGAAGCATC GAAAGCGATA GGGTACGTGA AAGTGAGCAT GGATGGTGTG CCATACTTGA GGAAGATTGA CCTTGGTTCG AGCAACAGTT ATAATAATCT AGCCACGGTT CTTGAGAATC TCTTCGGCTG TCTTGGCCTA GGAGTAGCGA AGGAGGGTAA GAAATGCGAA TACATTATTA TATACGAAGA CAAGGATAGA GACTGGATGC TCGTTGGAGA TGTACCTTGG CAGATGTTCA AAGAATCATG CAAGAGGCTT AGGATCGTGA AGAGATCAGA TGCGACTGGT TTTGGCCTGC AGCGAGATTA ATTATACTAG 
Length660
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26777832.. 26779064
Download Sequence
A.thaliana
AGI-codeAT1G52830.1
Descriptionindole-3-acetic acid 6
TAIR curator summaryAn extragenic dominant suppressor of the hy2 mutant phenotype. Also exhibits aspects of constitutive photomorphogenetic phenotype in the absence of hy2. Mutants have dominant leaf curling phenotype shortened hypocotyls and reduced apical hook. Induced by indole-3-acetic acid.
Alias[IAA6][SHY1][indole-3-acetic acid 6][SHORT HYPOCOTYL 1]
Gene coexpression
MR
MR Locus Description
17.4356 Ahg899060 Cytochrome P450 superfamily protein
22.561 Ahg930150 SKP1-like 10
22.7156 Ahg485861 Plant calmodulin-binding protein-related
25.7682 Ahg943128
32.5269 Ahg934862 Protein kinase superfamily protein
33.8231 Ahg915185
33.8231 Ahg941356 ARM repeat superfamily protein
40.2492 Ahg475729
51.4393 Ahg483920 Signal transduction histidine kinase
52.6308 Ahg493945 oleosin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression