Detail



ID : Ahg474504

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474504|fgenesh2_kg.1__4458__AT1G53710.1
Sequence
TACTCAAACG CAGCTCAGCG TCTGTCGCGT CTTGACCGCT ATTTTTGGTC AACAACAACG ATCACCAGAT ATCTCGGCGA AGCAAGCAAA GCCGAGAAGG GAGGAGATTC AGATGCTCGG GAAGATGAAA CACCACCATA AGCTCACGGT GGCCTTATGT CTCATTTGGG CTGCGACGAT CCTCTACGGC GAAATGTTCG CCTTCTGGGT TCCTTCTCTC TTCACTTGTT CTTGGCCTCA CCATAAGAGT TATGGAGTGG AGAGTGATGG GAATTTTACT AAAGTAGCCA TTGTTACTGA TCCACAGCTC ATGGATAAGA CATCGTTTCG TTTGTCGTCA AAGACGCTTG CTTTGGAGCT TGCTCAGCTT TATACTGATA TAAACATGCG GAGATCATTC TTTCGGTCTG TCTTGCCCTT CAAACCCGAT GTTGTTTTGT TTTTAGGTGA TTATTTCGAC AGCGGGCCAT TTCTTCCCGA GGAAGAATGG CAGGAATCTT TAAGCCGATT TAAACATGTA TTTGGTTTGA ATTCTCAAGG CAAAGTTGGT GACATCCCTA CATTTTACAT CCCTGGGAAC CATGATCTTG GCTATTCTCG GGTTGCTTCC CATAAGCAAG ACGTGATTGA TCGATACGAA AAAGTATTTG GGTTCAGAAA CCACAGATTT ATGATTGGAA GTGTTGAGTT CATCAGTATT GATGCACAAG CTATCGATGG GAATCCTCAA AAGGATCTAG CATCCGAAGT TTGGAAGTTT GTACAAAATG TCTCAACCGA TGCACAGTCA CATGACTCAC ATCCTAGAGT TTTGTTGACC CACATCCCGT TATATCGGCC CGATCAAACC CCATGCGGCC CTCACCGTGG TGCTTCTGTC ATTGATCAGC GGTTTTGGCG CCATTTTCAA GATCAAGAAG TAATATACCA GAATTATATC ACTCCAGAAT CATCTACGAA GTTATTGGAG TTGATCAAAC CTATACTCGT TCTGTCTGGC CATGATCATG ACCAATGCAC TATAACCCAC AAATCGAAAG CAGGATCTGT AAAAGAGCAT ACTGTAGGTA CTATAAGCTG GCAACAAGGA AATATATATC CGTCATTCAT GCTATTATCT GTTCCCAATG CCATCCATCA AAACTCATCT GATCTAGATA AAATGTTACA CACCCAATTA TGCTTCCTTC CGTGCCAGTT ATTCATTTAC ATGTGGTACC TTTCTCTATT CGCTATGTCC CTTCTTGCTC TCCTTTTCTG GCCAAATCAT GGAATAAGCT TCTTAAACAA CGCTGCAGAC TGTATCTCGA ATGTAATGAA GTCAAGCTTT TTAAGCAGCG TCACCAAGGA GAAGAATGAA GATGAGAACT GTGAGTATGA AATGGTATGG GACGCAGAAG GATCTATGCA TCTTGTGAAG AAAGCTCTTC AAACTCCTGT GAAACGTCAA AGCGATAAAC CTCTTGTAGA AAAGGGTAAC GCGGTGTTGA GATCAGCTGC TAGAAAAAAC GCTAGCGAAC AGATTGAGCT TGTGATGGAC GCGGATGTAA ATGCAGTTGC TGGTGGGTCT GATCCTCTGA TGAGATCAGC ATCAAAATCA AGAACAAAAC TTGTGATCCA GAGAGTGATA CGTACAATCA TGATGATCAT CGTCATTGCG GCGTTAAACG TTCCCATTTA CATCTGGCTG CTGTTCAAGG ATTGGGTTGA GCAGGAGTGA TAAACTAGAG ATAAATCTCA TTGGCATGAA ATTTTGGACT AAGCAAACTA TCATCTGTAG GATTTGTGGT GAAAAGTGAA AACTGTTGTT GTATTATTAG AATATGAGAA TCAAAGGAGA CATGTTTTAG TCTATATGGT TCAACATAAC CATAGACTTA TTTATTTGGT CTTATT 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27337646.. 27340910
Download Sequence
A.thaliana
AGI-codeAT1G53710.1
DescriptionCalcineurin-like metallo-phosphoesterase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.83095 Ahg936415
9.27362 Ahg497270 global transcription factor group E7
35.4965 Ahg494236 formyltetrahydrofolate deformylase, putative
51.8459 Ahg481441 syntaxin of plants 32
63.2772 Ahg323073 zinc knuckle (CCHC-type) family protein
65.521 Ahg938262 Leucine-rich repeat protein kinase family protein
75.7364 Ahg472179 pentatricopeptide (PPR) repeat-containing protein
82.3408 Ahg887811
82.6136 Ahg476263 Cytidine/deoxycytidylate deaminase family protein
93.488 Ahg477950 HCO3- transporter family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression