Detail



ID : Ahg474709

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474709|fgenesh2_kg.1__4663__AT1G54385.2
Sequence
AAAAAAGAAG CAGACACACA CACAAAAAAC CTAAACCCCA CACACTTTTG AACCGCGGGA TTTTTCATTT GTAAGTTTCC GCCACACACT TTTGATTTTC TCATTCCAAG GTTTCACTTT GCTACTACAC ATCGATTTCT TTTGCTTTTG AATTCTCCAA AGGTTTCATC TTTGTACGGT CAAAGCAAAG AAGTAGCTCA AGTAGAAGAA GCAGTTGGAG TAATGGGTTT GAATCTGAAT CCAATTTTGC GACAAGAGTT GGCTAATCTT GACAAAGACA CAGAGAGTCG TAAATCAGCA ATGAAAGCTC TTAAATCTTA TGTGAAGGAC TTGGATTCAA AGGCTATTCC TGGTTTTCTA GCTCAAGTTT TCGAGACTAA AGAAACCAAC TCTTTGTCCG GTGAATACAC GATTTCGCTT TATGAAATAC TTGCTCGTGT TCATGGACCT AACATTGTTC CTCAGATTGA TACAATCATG TCCACTATTG TCAAGACTTT GGCTTCAAGT GCTGGTTCTT TCCCTCTTCA ACAAGCTTGT TCGAAAGTTA TTCCGGCAAT TGCTCGATAT GGGATCGATC CGACAACTAA AGACGACAAG AAACGAGTTA TAATCCACTC TTTGTGTAAG CCATCTTACG GATTCTCTAC TGGCCTCTCA AGAGAGCCTT ACTTCAGGGG CTGCTTTGTG TTTGAAGGCT CTTGTGGATT GGTTTGTCAA AATGTGGTAG TTGCGTTGGA CTCAAACTCC AACCAAACAC ATCTTCAAAT GGGTCTGGTT ATGTCACTTG CCAAACATAA TCCTTTGATT GTTGAAGCCT ATGCAAGGTT GTTGATACAC ACGGGATTGC GAATTCTGGG ATTCGGAGTA TCTGAAGGAA ACTCGCAGAA ACGGTTATCA GCAGTCCAAA TGTTGAACTT CCTAATGAAG TGCTTGGACC CGAGAAGCAT ATACTCCGAA GTTGAGTTAA TAATCAAAGA AATGGAGAGG TGTCAATCTG ATCAAATGGC TTATGTTAGA GGAGCTGCTT ATGAAGCAAT GATGACTTCA AAAAGAATAG CGGGAGAGCT CGAGTCGAAG CTGGAGAAGG GTTGTCGTTC TGTTACTGGT TCGAATTACA GTCGAAGAAA CTGTTCAGCC ATTGTTAATG GTCATTTTCC TGATGACCCC TTATCACCTG AATCACAGAC TCTAGGCTCG TTCAGCGGAT ATGATTCTCC GGTTGAGTCC TCGCCTATTT CTCATACTTC TTGTAACTCT GAATTTGATC GGCGGAGTGT GAATCGCAAA CTTTGGAGAC CTGATCAAAA TGGAGGAGGG GTTGATATCT CTTTAAAGGA TGGTCTTTTC TCCGGTGTAA CTAAAGGAAA CACCACTGTC TCTGATTCAC CTCTTGTCCC CTATGACACT TGTGAAAATG GAGATGAATT CGAAGGTTTT CTGATGGAAA GTTTGAGAAA CAGGCGGCTG CAAAACACCA CTCCTAGTCC TCAGAGACAG CGTTCACGAC GTATCAATGC TGAAGATTTC AACATCTTCA GCACTCCACG GAAGCTTATC AGCTCTCTTC AATATCCTGA TGATGTTGAC TTAGACCATT CAGATATCCA AAGTCCAATA CCGAGAAGCG GAAGAGAGAA AACCATAGGA TCTCGCAAGA ATCCTCAACT CAGAAAGCAA TTTTCAACCA TGGCGGAAAC AATGTCATCA ACTGTCAAAT TTAGTGGATA TACATCTCAA ACACAGATGA TATCGGGTAA GAAGAAGAAG AAGATGAGCT ATGCCAAATT CGTGATTGCG ATATCATTTG TTGCGATGGC TCTCTTTACA ACCGTGATAT TGATGGTGAA TCAAGATGAC GATGTTGGTT ACTACACTGT TCCTACATGA TTCACATCTA TTTGGTGTTA AGTTCAATCG TAGTGTAGCA GAGAGAGTAG TTTAGCTGTT TAATTACGTG TTAGTTGTCT GTAATGAACT TCGTACAAGA T 
Length1991
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28604886.. 28607642
Download Sequence
A.thaliana
AGI-codeAT1G54385.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.8995 Ahg494222 Pectin lyase-like superfamily protein
27.1293 Ahg496451 tubulin beta chain 2
28.3549 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
30.8383 Ahg481792 Pathogenesis-related thaumatin superfamily protein
37.5233 Ahg478179 lipid transfer protein 6
38.3406 Ahg351411 HXXXD-type acyl-transferase family protein
44.3959 Ahg920798 plasmodesmata callose-binding protein 3
44.6094 Ahg948089 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
48.2183 Ahg477690 Li-tolerant lipase 1
49.6387 Ahg485521 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression